MLOC_10675 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.988143.302533.449663.00331
LEAShoots from the seedlings (10 cm shoot stage)1.203352.212341.213031.21865
INF1Young developing inflorescences (5mm)6.420935.965947.934085.04155
INF2Developing inflorescences (1-1.5 cm)6.906567.470197.961127.20326
ROORoots from the seedlings (10 cm shoot stage)1.774421.560442.719241.85397
NODDeveloping tillers at six leaf stage, 3rd internode0.118971.152922.209383.94251
CAR5Developing grain, bracts removed (5 DPA)3.617313.870013.667463.10306
CAR15Developing grain, bracts removed (15 DPA)0.289020.7478360.8581741.14048



CDS Structure of MLOC_10675






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10675.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10675.3CUST_11319_PI427708083AvailableAvailablecontig_1559582 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g34330.1 +1 2e-29 115 57/80 (71%) 13101.m03455 protein BAH domain containing protein, expressed
TAIR PP10 AT4G11560.1 +1 6e-16 76 35/81 (43%) bromo-adjacent homology (BAH) domain-containing protein | chr4:7000095-7003445 REVERSE LENGTH=587