MLOC_10669 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.464981.50191.443491.51088
LEAShoots from the seedlings (10 cm shoot stage)0.326170.5937480.4551960.388507
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)4.538682.979271.392513.35755
NODDeveloping tillers at six leaf stage, 3rd internode00.016183100.109986
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_10669






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10669.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361229NoneNoneNoneNone
AK362363NoneNoneNoneNone
MLOC_10669.1CUST_919_PI427708080AvailableAvailablecontig_1559567 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g35350.2 +3 0.0 598 331/564 (59%) 13107.m03614 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
TAIR PP10 AT5G55180.1 +3 1e-109 343 207/470 (44%) O-Glycosyl hydrolases family 17 protein | chr5:22388834-22390550 FORWARD LENGTH=460