- Predicted Gene MLOC_10663
MLOC_10663 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 35.1382 | 38.9807 | 40.4606 | 25.4147 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 32.3348 | 22.5504 | 28.8067 | 16.6996 |
INF1 | Young developing inflorescences (5mm) | 108.556 | 87.1951 | 89.1326 | 55.6456 |
INF2 | Developing inflorescences (1-1.5 cm) | 75.4414 | 69.9159 | 77.0964 | 56.2045 |
ROO | Roots from the seedlings (10 cm shoot stage) | 26.4687 | 43.2619 | 48.1363 | 28.6481 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.01211 | 3.9925 | 8.15996 | 10.5343 |
CAR5 | Developing grain, bracts removed (5 DPA) | 50.6462 | 53.393 | 55.4431 | 32.9305 |
CAR15 | Developing grain, bracts removed (15 DPA) | 37.9007 | 34.8695 | 32.0505 | 55.7922 |
CDS Structure of MLOC_10663
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10663.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g41750.1 |
-2 |
6e-130 |
406 |
203/220 (92%) |
13107.m04356 protein 40S ribosomal protein S3-1, putative, expressed |
TAIR PP10 |
AT5G35530.1 |
-2 |
9e-123 |
386 |
191/222 (86%) |
Ribosomal protein S3 family protein | chr5:13710355-13712192 REVERSE LENGTH=248 |