MLOC_10663 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.138238.980740.460625.4147
LEAShoots from the seedlings (10 cm shoot stage)32.334822.550428.806716.6996
INF1Young developing inflorescences (5mm)108.55687.195189.132655.6456
INF2Developing inflorescences (1-1.5 cm)75.441469.915977.096456.2045
ROORoots from the seedlings (10 cm shoot stage)26.468743.261948.136328.6481
NODDeveloping tillers at six leaf stage, 3rd internode5.012113.99258.1599610.5343
CAR5Developing grain, bracts removed (5 DPA)50.646253.39355.443132.9305
CAR15Developing grain, bracts removed (15 DPA)37.900734.869532.050555.7922



CDS Structure of MLOC_10663






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10663.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366524NoneNoneNoneNone
MLOC_10663.1CUST_917_PI427708080AvailableAvailablecontig_1559558 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g41750.1 -2 6e-130 406 203/220 (92%) 13107.m04356 protein 40S ribosomal protein S3-1, putative, expressed
TAIR PP10 AT5G35530.1 -2 9e-123 386 191/222 (86%) Ribosomal protein S3 family protein | chr5:13710355-13712192 REVERSE LENGTH=248