MLOC_10658 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.236712.426710.986614.0864
LEAShoots from the seedlings (10 cm shoot stage)21.135435.781146.317932.1871
INF1Young developing inflorescences (5mm)10.965213.990512.535312.0403
INF2Developing inflorescences (1-1.5 cm)16.323118.285217.20321.6634
ROORoots from the seedlings (10 cm shoot stage)6.583737.002346.401849.41601
NODDeveloping tillers at six leaf stage, 3rd internode12.326613.666415.051645.3103
CAR5Developing grain, bracts removed (5 DPA)14.222113.800713.890715.9863
CAR15Developing grain, bracts removed (15 DPA)2.430642.251892.000855.96804



CDS Structure of MLOC_10658






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10658.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370511NoneNoneNoneNone
MLOC_10658.1CUST_916_PI427708080AvailableAvailablecontig_1559549 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g04480.1 -3 0.0 801 412/478 (86%) 13112.m00429 protein cytochrome P450, putative, expressed
TAIR PP10 AT5G05690.1 -3 0.0 536 284/464 (61%) | Symbols: CPD, CYP90A, CYP90, CBB3, DWF3, CYP90A1 | Cytochrome P450 superfamily protein | chr5:1702907-1706705 REVERSE LENGTH=472