- Predicted Gene MLOC_10657
MLOC_10657 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 25.9981 | 37.7595 | 40.0941 | 33.3046 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 20.5299 | 27.8462 | 33.1461 | 21.7837 |
INF1 | Young developing inflorescences (5mm) | 18.7004 | 19.9885 | 18.6866 | 15.1324 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.4811 | 17.3511 | 17.7518 | 17.6798 |
ROO | Roots from the seedlings (10 cm shoot stage) | 32.6193 | 37.422 | 40.0809 | 41.836 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.1204 | 20.9841 | 13.9978 | 59.5058 |
CAR5 | Developing grain, bracts removed (5 DPA) | 29.7598 | 26.9193 | 29.4912 | 25.9419 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.4416 | 6.62447 | 7.53947 | 15.614 |
CDS Structure of MLOC_10657
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10657.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g13140.1 |
+2 |
2e-163 |
490 |
232/266 (87%) |
13102.m01457 protein xaa-Pro dipeptidase, putative, expressed |
TAIR PP10 |
AT4G29490.1 |
+2 |
3e-135 |
416 |
192/262 (73%) |
Metallopeptidase M24 family protein | chr4:14487943-14491321 FORWARD LENGTH=486 |