MLOC_10655 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains30.42545.655845.353737.2092
LEAShoots from the seedlings (10 cm shoot stage)26.757715.964117.369216.2635
INF1Young developing inflorescences (5mm)36.80440.265239.376729.0248
INF2Developing inflorescences (1-1.5 cm)32.754737.230237.241435.0242
ROORoots from the seedlings (10 cm shoot stage)25.925630.646526.301131.7783
NODDeveloping tillers at six leaf stage, 3rd internode26.055427.21621.171778.3623
CAR5Developing grain, bracts removed (5 DPA)46.141.215543.031537.5394
CAR15Developing grain, bracts removed (15 DPA)24.97222.023125.558547.4772



CDS Structure of MLOC_10655






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10655.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250454.1NoneNoneNoneNone
MLOC_10655.1CUST_17883_PI427708080AvailableAvailablecontig_1559537 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g36994.1 -3 0.0 1305 647/763 (85%) 13108.m03891 protein protein transport protein, putative, expressed
TAIR PP10 AT2G21630.1 -3 0.0 988 492/764 (64%) Sec23/Sec24 protein transport family protein | chr2:9250346-9253829 FORWARD LENGTH=761