MLOC_10654 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.464723.075092.660042.70028
LEAShoots from the seedlings (10 cm shoot stage)3.455991.986394.968142.84264
INF1Young developing inflorescences (5mm)7.271565.429158.330816.29885
INF2Developing inflorescences (1-1.5 cm)1.629591.870592.557742.31624
ROORoots from the seedlings (10 cm shoot stage)0.1788360.392330.9298120.522195
NODDeveloping tillers at six leaf stage, 3rd internode10.58832.748256.33559.52206
CAR5Developing grain, bracts removed (5 DPA)0.6468710.6821390.9610010.796066
CAR15Developing grain, bracts removed (15 DPA)1.425441.688581.801714.07543



CDS Structure of MLOC_10654






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10654.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10654.1CUST_1659_PI427708083AvailableAvailablecontig_1559537 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g28620.1 -3 9e-33 124 78/156 (50%) 13109.m02824 protein gibberellin receptor GID1L2, putative, expressed
TAIR PP10None-----