MLOC_10647 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.77927.587526.59132.0234
LEAShoots from the seedlings (10 cm shoot stage)18.332915.698421.185915.8753
INF1Young developing inflorescences (5mm)32.238638.525938.249633.0101
INF2Developing inflorescences (1-1.5 cm)25.733831.215428.410833.7727
ROORoots from the seedlings (10 cm shoot stage)32.062328.574625.222936.4057
NODDeveloping tillers at six leaf stage, 3rd internode17.8222.884335.386275.5511
CAR5Developing grain, bracts removed (5 DPA)41.808844.451546.500847.9689
CAR15Developing grain, bracts removed (15 DPA)25.573924.684324.902763.7424



CDS Structure of MLOC_10647






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10647.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373843NoneNoneNoneNone
MLOC_10647.1CUST_915_PI427708080AvailableAvailablecontig_1559533 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g36440.1 +3 0.0 608 302/312 (97%) 13109.m03592 protein transcription initiation factor IIB, putative, expressed
TAIR PP10 AT3G10330.1 +3 0.0 537 260/312 (83%) Cyclin-like family protein | chr3:3199907-3201642 FORWARD LENGTH=312