- Predicted Gene MLOC_10647
MLOC_10647 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_10647_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_10647_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 35.779 | 27.5875 | 26.591 | 32.0234 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.3329 | 15.6984 | 21.1859 | 15.8753 |
INF1 | Young developing inflorescences (5mm) | 32.2386 | 38.5259 | 38.2496 | 33.0101 |
INF2 | Developing inflorescences (1-1.5 cm) | 25.7338 | 31.2154 | 28.4108 | 33.7727 |
ROO | Roots from the seedlings (10 cm shoot stage) | 32.0623 | 28.5746 | 25.2229 | 36.4057 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.82 | 22.8843 | 35.3862 | 75.5511 |
CAR5 | Developing grain, bracts removed (5 DPA) | 41.8088 | 44.4515 | 46.5008 | 47.9689 |
CAR15 | Developing grain, bracts removed (15 DPA) | 25.5739 | 24.6843 | 24.9027 | 63.7424 |
CDS Structure of MLOC_10647
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10647.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g36440.1 |
+3 |
0.0 |
608 |
302/312 (97%) |
13109.m03592 protein transcription initiation factor IIB, putative, expressed |
TAIR PP10 |
AT3G10330.1 |
+3 |
0.0 |
537 |
260/312 (83%) |
Cyclin-like family protein | chr3:3199907-3201642 FORWARD LENGTH=312 |