MLOC_10622 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains75.047681.8583.023481.3323
LEAShoots from the seedlings (10 cm shoot stage)55.767970.882399.810864.5612
INF1Young developing inflorescences (5mm)20.653224.518126.297820.0851
INF2Developing inflorescences (1-1.5 cm)19.72822.369621.582523.3702
ROORoots from the seedlings (10 cm shoot stage)126.576100.01988.6616125.14
NODDeveloping tillers at six leaf stage, 3rd internode66.077674.916149.9036236.62
CAR5Developing grain, bracts removed (5 DPA)56.174659.725957.338456.9076
CAR15Developing grain, bracts removed (15 DPA)24.537823.587421.662655.2392



CDS Structure of MLOC_10622






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10622.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373695NoneNoneNoneNone
MLOC_10622.1CUST_912_PI427708080AvailableAvailablecontig_1559483 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13840.1 +3 0.0 832 453/501 (90%) 13102.m01539 protein citrate synthase, putative, expressed
TAIR PP10 AT2G42790.1 +3 0.0 758 404/514 (79%) | Symbols: CSY3 | citrate synthase 3 | chr2:17803132-17805991 REVERSE LENGTH=509