MLOC_10593 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2097450.9251610.2382960.69378
LEAShoots from the seedlings (10 cm shoot stage)0.8321110.9904022.702811.49417
INF1Young developing inflorescences (5mm)0.3971581.21211.474121.21662
INF2Developing inflorescences (1-1.5 cm)3.464932.972262.942264.17087
ROORoots from the seedlings (10 cm shoot stage)00.6487202.07835
NODDeveloping tillers at six leaf stage, 3rd internode0.9960180.3772591.85032.20528
CAR5Developing grain, bracts removed (5 DPA)1.936593.484920.9793152.73588
CAR15Developing grain, bracts removed (15 DPA)0.32441500.3162020.830959



CDS Structure of MLOC_10593






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10593.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10593.2CUST_1654_PI427708083AvailableAvailablecontig_155942 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g49160.1 -1 2e-13 65 60/110 (55%) 13106.m05248 protein thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed
TAIR PP10None-----