- Predicted Gene MLOC_10591
MLOC_10591 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.17003 | 7.59525 | 7.75166 | 7.81294 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.29966 | 5.79814 | 7.98024 | 5.9393 |
| INF1 | Young developing inflorescences (5mm) | 8.26394 | 8.46408 | 8.00127 | 6.91034 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.87195 | 8.65507 | 8.46172 | 8.71235 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.01546 | 9.2257 | 7.41164 | 10.4623 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.28204 | 4.38288 | 5.12229 | 14.4844 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.0824 | 13.008 | 14.5177 | 13.1823 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.88412 | 4.32915 | 4.44531 | 10.4428 |
CDS Structure of MLOC_10591
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10591.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g16354.1 |
+1 |
3e-156 |
463 |
247/329 (75%) |
13101.m01827 protein rab GDP dissociation inhibitor alpha, putative, expressed |
| TAIR PP10 |
AT3G06540.1 |
+1 |
1e-153 |
464 |
261/555 (47%) |
| Symbols: REP, AthREP | Rab escort protein | chr3:2035201-2037662 REVERSE LENGTH=563 |
