- Predicted Gene MLOC_10579
MLOC_10579 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 59.6061 | 61.5572 | 62.2308 | 67.7164 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 77.1587 | 79.4666 | 49.3832 | 61.8556 |
| INF1 | Young developing inflorescences (5mm) | 99.8128 | 116.032 | 118.755 | 99.1863 |
| INF2 | Developing inflorescences (1-1.5 cm) | 106.332 | 109.401 | 108.061 | 125.801 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 50.8342 | 51.6929 | 57.2938 | 69.858 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 30.2193 | 23.265 | 18.3183 | 77.0561 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 51.2071 | 47.6847 | 39.9671 | 48.9016 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.4778 | 10.5341 | 9.98871 | 26.0361 |
CDS Structure of MLOC_10579
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10579.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g12220.1 |
-2 |
1e-116 |
343 |
162/193 (84%) |
13106.m01334 protein HVA22, putative, expressed |
| TAIR PP10 |
AT1G74520.1 |
-2 |
2e-73 |
231 |
106/154 (69%) |
| Symbols: ATHVA22A, HVA22A | HVA22 homologue A | chr1:28008109-28009156 REVERSE LENGTH=177 |