MLOC_10575 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.380436.022632.930229.619
LEAShoots from the seedlings (10 cm shoot stage)31.291124.710923.949622.365
INF1Young developing inflorescences (5mm)46.126144.759844.688233.9424
INF2Developing inflorescences (1-1.5 cm)40.280339.888537.698239.6225
ROORoots from the seedlings (10 cm shoot stage)11.093227.15721.518427.5431
NODDeveloping tillers at six leaf stage, 3rd internode17.747316.993516.88656.2333
CAR5Developing grain, bracts removed (5 DPA)31.052731.029833.446127.9369
CAR15Developing grain, bracts removed (15 DPA)6.303594.474625.5730411.0725



CDS Structure of MLOC_10575






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10575.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10575.1CUST_8652_PI427708080AvailableAvailablecontig_1559389 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g37825.2 +1 0.0 814 416/463 (90%) 13101.m15039 protein M16 domain containing zinc peptidase, putative, expressed
TAIR PP10 AT5G56730.1 +1 0.0 584 300/459 (65%) Insulinase (Peptidase family M16) protein | chr5:22946906-22952576 REVERSE LENGTH=956