MLOC_10567 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains73.007461.891157.634365.5404
LEAShoots from the seedlings (10 cm shoot stage)16.448516.391612.532912.8515
INF1Young developing inflorescences (5mm)68.667271.970478.598164.6864
INF2Developing inflorescences (1-1.5 cm)53.66444.418446.454254.0238
ROORoots from the seedlings (10 cm shoot stage)51.855835.830743.497646.7326
NODDeveloping tillers at six leaf stage, 3rd internode2.320133.9268814.905718.7953
CAR5Developing grain, bracts removed (5 DPA)35.378537.284535.644936.5125
CAR15Developing grain, bracts removed (15 DPA)22.666919.034114.591546.9354



CDS Structure of MLOC_10567






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10567.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366217NoneNoneNoneNone
MLOC_10567.1CUST_899_PI427708080AvailableAvailablecontig_1559373 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g56800.1 -1 0.0 829 445/493 (90%) 13103.m06205 protein CBS domain containing membrane protein, putative, expressed
TAIR PP10 AT1G16350.1 -1 0.0 613 330/503 (66%) Aldolase-type TIM barrel family protein | chr1:5590951-5592872 FORWARD LENGTH=502