- Predicted Gene MLOC_10557
MLOC_10557 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 43.7274 | 24.1527 | 31.2817 | 23.409 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.0827 | 3.53609 | 4.58101 | 6.73589 |
INF1 | Young developing inflorescences (5mm) | 70.8525 | 83.5614 | 91.0763 | 49.2443 |
INF2 | Developing inflorescences (1-1.5 cm) | 58.0977 | 72.2446 | 61.6814 | 52.7871 |
ROO | Roots from the seedlings (10 cm shoot stage) | 27.0365 | 17.0569 | 23.2678 | 15.9634 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.99791 | 2.97618 | 3.18548 | 7.207 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.9674 | 15.0515 | 13.096 | 10.0586 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.37629 | 0.721128 | 1.50039 | 2.05911 |
CDS Structure of MLOC_10557
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10557.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g38560.1 |
-2 |
2e-17 |
81 |
41/41 (100%) |
13105.m04047 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative |
TAIR PP10 |
AT3G09480.1 |
-2 |
3e-17 |
80 |
40/41 (98%) |
Histone superfamily protein | chr3:2914890-2915270 REVERSE LENGTH=126 |