- Predicted Gene MLOC_10539
MLOC_10539 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.07773 | 2.55417 | 2.22814 | 2.0822 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.105461 | 0.0372136 | 0.0304803 | 0.0497639 |
| INF1 | Young developing inflorescences (5mm) | 0.204388 | 0.35256 | 0.20769 | 0.191772 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.160028 | 0.226168 | 0.190509 | 0.187797 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.838992 | 2.41489 | 0.829988 | 2.05629 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.00698565 | 0.0108251 | 0.0354597 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0594883 | 0.344211 | 0.170991 | 0.165937 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0205165 | 0 | 0.0444322 |
CDS Structure of MLOC_10539
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10539.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g30770.1 |
-1 |
0.0 |
1040 |
557/680 (82%) |
13108.m03185 protein ABC transporter, ATP-binding protein, putative, expressed |
| TAIR PP10 |
AT3G47780.1 |
-1 |
0.0 |
850 |
444/677 (66%) |
| Symbols: ATATH6, ATH6 | ABC2 homolog 6 | chr3:17624500-17628972 FORWARD LENGTH=935 |