MLOC_10517 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.3723315.712812.943913.0273
LEAShoots from the seedlings (10 cm shoot stage)14.01487.964547.156688.60792
INF1Young developing inflorescences (5mm)19.111819.272717.27415.0229
INF2Developing inflorescences (1-1.5 cm)14.504618.286516.544617.8642
ROORoots from the seedlings (10 cm shoot stage)4.4675811.6437.8223912.539
NODDeveloping tillers at six leaf stage, 3rd internode15.189311.07417.4214138.2894
CAR5Developing grain, bracts removed (5 DPA)11.303312.115210.967910.9276
CAR15Developing grain, bracts removed (15 DPA)5.761645.111434.3586811.5607



CDS Structure of MLOC_10517






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK365722
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365722CUST_21150_PI427708080NoneNoneNone
MLOC_10517.2NoneAvailableAvailablecontig_1559284 (Mapped)
MLOC_18583.2NoneAvailableNonecontig_1581108 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----