MLOC_10511 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.513985.937884.877566.01634
LEAShoots from the seedlings (10 cm shoot stage)4.885912.581434.423353.30599
INF1Young developing inflorescences (5mm)16.1618.654922.299617.3879
INF2Developing inflorescences (1-1.5 cm)30.331228.335228.254134.2922
ROORoots from the seedlings (10 cm shoot stage)7.413785.56467.745637.20864
NODDeveloping tillers at six leaf stage, 3rd internode4.086827.420778.2501822.606
CAR5Developing grain, bracts removed (5 DPA)8.724577.022598.008268.36141
CAR15Developing grain, bracts removed (15 DPA)4.206852.953154.495559.72702



CDS Structure of MLOC_10511






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10511.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354656NoneNoneNoneNone
MLOC_10511.4CUST_897_PI427708080AvailableAvailablecontig_1559260 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g36140.1 +2 5e-57 195 101/155 (65%) 13109.m03551 protein RNA recognition motif 2 domain containing protein, expressed
TAIR PP10 AT3G26120.1 +2 9e-34 134 66/152 (43%) | Symbols: TEL1 | terminal EAR1-like 1 | chr3:9546398-9549186 FORWARD LENGTH=615