MLOC_10496 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2835310.7034481.190080.825568
LEAShoots from the seedlings (10 cm shoot stage)0.7973710.6488910.8910070.856447
INF1Young developing inflorescences (5mm)1.04870.9366622.281081.26923
INF2Developing inflorescences (1-1.5 cm)3.763812.241663.065823.40459
ROORoots from the seedlings (10 cm shoot stage)0.4979440.5477290.1603210.701199
NODDeveloping tillers at six leaf stage, 3rd internode0.2090690.3383650.371341.28068
CAR5Developing grain, bracts removed (5 DPA)1.0650.7322931.593261.18181
CAR15Developing grain, bracts removed (15 DPA)1.094331.328570.6208412.78193



CDS Structure of MLOC_10496






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10496.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10496.1CUST_8636_PI427708080AvailableAvailablecontig_1559214 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g30780.1 +2 8e-13 69 39/99 (39%) 13112.m03136 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----