MLOC_10485 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.264152.654852.891442.99041
LEAShoots from the seedlings (10 cm shoot stage)0.6423220.3687510.699950.505787
INF1Young developing inflorescences (5mm)000.05211230.045907
INF2Developing inflorescences (1-1.5 cm)000.1044490.143871
ROORoots from the seedlings (10 cm shoot stage)9.106886.288825.46257.79554
NODDeveloping tillers at six leaf stage, 3rd internode3.328742.346141.997276.91298
CAR5Developing grain, bracts removed (5 DPA)0.6204240.5748280.612510.633944
CAR15Developing grain, bracts removed (15 DPA)00.044844100.15454



CDS Structure of MLOC_10485






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10485.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362654NoneNoneNoneNone
MLOC_10485.1CUST_893_PI427708080AvailableAvailablecontig_1559190 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g42190.1 +2 1e-91 276 160/202 (79%) 13105.m04486 protein NADPH-dependent FMN reductase domain containing protein, expressed
TAIR PP10 AT4G27270.1 +2 1e-86 262 144/202 (71%) Quinone reductase family protein | chr4:13661458-13663243 REVERSE LENGTH=205