- Predicted Gene MLOC_10482
MLOC_10482 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_10482_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_10482_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.7288 | 19.0845 | 15.2254 | 13.8929 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.0263 | 7.56588 | 7.5087 | 7.48651 |
INF1 | Young developing inflorescences (5mm) | 74.8572 | 69.5049 | 66.2916 | 54.7746 |
INF2 | Developing inflorescences (1-1.5 cm) | 67.3264 | 53.9091 | 52.2233 | 59.6278 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.46135 | 13.3538 | 9.32912 | 13.439 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.125735 | 0.125428 | 0.433297 | 0.603315 |
CAR5 | Developing grain, bracts removed (5 DPA) | 16.302 | 14.5973 | 16.1456 | 14.0833 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.68395 | 5.5686 | 5.33678 | 11.3212 |
CDS Structure of MLOC_10482
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10482.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g10350.1 |
-2 |
0.0 |
1311 |
691/884 (78%) |
13107.m01051 protein S1 RNA binding domain containing protein, expressed |
TAIR PP10 |
AT3G11964.1 |
-2 |
0.0 |
1749 |
967/1821 (53%) |
RNA binding;RNA binding | chr3:3793957-3806626 REVERSE LENGTH=1896 |