- Predicted Gene MLOC_10478
MLOC_10478 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 71.8872 | 73.3047 | 76.0226 | 79.7945 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 66.9981 | 52.6728 | 46.3291 | 50.9479 |
| INF1 | Young developing inflorescences (5mm) | 136.631 | 147.115 | 156.692 | 127.536 |
| INF2 | Developing inflorescences (1-1.5 cm) | 141.908 | 140.415 | 147.459 | 162.447 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 55.9467 | 79.8184 | 77.6234 | 102.055 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 51.4125 | 54.2435 | 60.6398 | 205.314 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 81.751 | 81.2738 | 81.8802 | 83.9908 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 53.6583 | 50.7683 | 55.1535 | 122.782 |
CDS Structure of MLOC_10478
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10478.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g36920.1 |
-2 |
0.0 |
784 |
408/431 (95%) |
13101.m03743 protein DEAD-box ATP-dependent RNA helicase, putative, expressed |
| TAIR PP10 |
AT5G11170.1 |
-2 |
0.0 |
737 |
381/428 (89%) |
DEAD/DEAH box RNA helicase family protein | chr5:3553334-3556646 FORWARD LENGTH=427 |