- Predicted Gene MLOC_10408
MLOC_10408 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_10408_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_10408_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.272001 | 0.119098 | 0.106343 | 0.176701 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.122752 | 0 | 0 | 0.111237 |
INF1 | Young developing inflorescences (5mm) | 0.0306098 | 0.0713396 | 0.0391833 | 0.0546703 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.102699 | 0.128916 | 0.163518 | 0.179784 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.786448 | 1.14874 | 0 | 2.19116 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.015344 | 0 | 0.144482 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0371738 | 0 | 0.0661796 |
CAR15 | Developing grain, bracts removed (15 DPA) | 24.9681 | 16.2064 | 21.2612 | 59.5665 |
CDS Structure of MLOC_10408
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10408.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g19770.1 |
+3 |
6e-77 |
240 |
156/231 (68%) |
13101.m02149 protein mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
TAIR PP10 |
AT4G16160.2 |
+3 |
9e-42 |
145 |
96/173 (55%) |
| Symbols: ATOEP16-2, ATOEP16-S | Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein | chr4:9157545-9158738 FORWARD LENGTH=178 |