- Predicted Gene MLOC_10404
MLOC_10404 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_10404_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_10404_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 75.1502 | 60.4774 | 66.6319 | 63.5702 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 61.1136 | 68.8521 | 66.1321 | 53.7698 |
INF1 | Young developing inflorescences (5mm) | 74.2904 | 89.8946 | 90.9911 | 68.4676 |
INF2 | Developing inflorescences (1-1.5 cm) | 83.5472 | 86.5491 | 92.7999 | 92.6974 |
ROO | Roots from the seedlings (10 cm shoot stage) | 112.807 | 100.389 | 102.787 | 121.353 |
NOD | Developing tillers at six leaf stage, 3rd internode | 131.647 | 100.783 | 131.896 | 350.42 |
CAR5 | Developing grain, bracts removed (5 DPA) | 76.2484 | 80.7218 | 83.3199 | 76.9466 |
CAR15 | Developing grain, bracts removed (15 DPA) | 21.2287 | 24.35 | 23.6052 | 49.7783 |
CDS Structure of MLOC_10404
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10404.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g48280.1 |
-3 |
1e-98 |
293 |
142/148 (96%) |
13101.m05001 protein ubiquitin-conjugating enzyme, putative, expressed |
TAIR PP10 |
AT1G16890.2 |
-3 |
1e-98 |
292 |
141/148 (95%) |
| Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme 36 | chr1:5776550-5778327 REVERSE LENGTH=153 |