MLOC_10364 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.274517.31211.95516.63
LEAShoots from the seedlings (10 cm shoot stage)30.059738.717643.669532.3069
INF1Young developing inflorescences (5mm)3.259590.8528180.4586861.36423
INF2Developing inflorescences (1-1.5 cm)0.8272141.064561.591941.28403
ROORoots from the seedlings (10 cm shoot stage)0.04912250.7395661.467560.917185
NODDeveloping tillers at six leaf stage, 3rd internode0.17540.2069250.3281880.71415
CAR5Developing grain, bracts removed (5 DPA)9.9942510.237511.077810.8282
CAR15Developing grain, bracts removed (15 DPA)0.06102730.1583260.1476020.318496



CDS Structure of MLOC_10364






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10364.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360901NoneNoneNoneNone
MLOC_10364.1CUST_866_PI427708080AvailableAvailablecontig_1558911 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g37450.1 -3 3e-105 328 247/394 (63%) 13106.m03878 protein GATA zinc finger domain containing protein, expressed
TAIR PP10 AT5G56860.1 -3 5e-19 90 41/49 (84%) | Symbols: GNC, GATA21 | GATA type zinc finger transcription factor family protein | chr5:22989630-22991351 REVERSE LENGTH=398