MLOC_10353 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3303820.6639030.4918520.538852
LEAShoots from the seedlings (10 cm shoot stage)0.5270420.0574300.276962
INF1Young developing inflorescences (5mm)0.3245720.2101070.3257280.232332
INF2Developing inflorescences (1-1.5 cm)1.493591.764881.88261.83909
ROORoots from the seedlings (10 cm shoot stage)0.5591230.3375220.3875420.459094
NODDeveloping tillers at six leaf stage, 3rd internode0.05377130.04375820.03673090.142026
CAR5Developing grain, bracts removed (5 DPA)0.6276280.661140.3432360.546925
CAR15Developing grain, bracts removed (15 DPA)0.08580990.09334010.0417950.196031



CDS Structure of MLOC_10353






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10353.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10353.3CUST_1627_PI427708083AvailableAvailablecontig_1558888 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g05880.1 +1 0.0 616 324/487 (67%) 13111.m00573 protein exo70 exocyst complex subunit, putative, expressed
TAIR PP10 AT5G03540.1 +1 7e-165 488 258/477 (54%) | Symbols: ATEXO70A1, EXO70A1 | exocyst subunit exo70 family protein A1 | chr5:889606-893916 FORWARD LENGTH=638