MLOC_10351 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.135873.531473.917143.45088
LEAShoots from the seedlings (10 cm shoot stage)5.733023.863715.021793.97361
INF1Young developing inflorescences (5mm)11.569414.006714.079510.8008
INF2Developing inflorescences (1-1.5 cm)16.990514.858914.895216.9094
ROORoots from the seedlings (10 cm shoot stage)2.726674.201834.703894.63984
NODDeveloping tillers at six leaf stage, 3rd internode3.406534.770177.2102816.0156
CAR5Developing grain, bracts removed (5 DPA)6.778996.57137.242256.62494
CAR15Developing grain, bracts removed (15 DPA)2.433521.887792.306215.02784



CDS Structure of MLOC_10351






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10351.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359490NoneNoneNoneNone
MLOC_10351.3CUST_864_PI427708080AvailableAvailablecontig_1558886 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g34430.1 -1 0.0 573 292/389 (75%) 13101.m03464 protein expressed protein
TAIR PP10 AT3G49410.1 -1 2e-126 394 233/584 (40%) Transcription factor IIIC, subunit 5 | chr3:18325015-18328858 FORWARD LENGTH=574