- Predicted Gene MLOC_10328
MLOC_10328 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 19.5797 | 13.9908 | 24.6832 | 22.3815 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.9648 | 6.11138 | 4.23322 | 7.36612 |
INF1 | Young developing inflorescences (5mm) | 4.10828 | 4.74966 | 5.44009 | 4.84822 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.28127 | 2.94314 | 3.91965 | 4.53749 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.7479 | 6.01204 | 11.7923 | 11.3242 |
NOD | Developing tillers at six leaf stage, 3rd internode | 20.8517 | 23.0548 | 10.161 | 89.441 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.02054 | 4.36244 | 5.45228 | 5.88967 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.735832 | 0.313726 | 0.226005 | 1.33219 |
CDS Structure of MLOC_10328
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10328.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g37890.1 |
-1 |
6e-64 |
202 |
94/103 (91%) |
13111.m03714 protein NAD dependent epimerase/dehydratase family protein, putative, expressed |
TAIR PP10 |
AT5G28840.2 |
-1 |
3e-62 |
197 |
91/103 (88%) |
| Symbols: GME | GDP-D-mannose 3,5-epimerase | chr5:10862472-10864024 REVERSE LENGTH=377 |