MLOC_10314 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.456340.511239.9141.9563
LEAShoots from the seedlings (10 cm shoot stage)13.45142.266751.801135.43844
INF1Young developing inflorescences (5mm)134.547121.853103.359109.605
INF2Developing inflorescences (1-1.5 cm)103.358126.233105.577134.278
ROORoots from the seedlings (10 cm shoot stage)11.151824.276918.481430.3519
NODDeveloping tillers at six leaf stage, 3rd internode0.4518230.4081860.1210311.41098
CAR5Developing grain, bracts removed (5 DPA)46.068239.900938.696843.1493
CAR15Developing grain, bracts removed (15 DPA)4.215033.674673.364169.39366



CDS Structure of MLOC_10314






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10314.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10314.1CUST_17541_PI427708080AvailableAvailablecontig_1558805 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g55410.2 -3 0.0 982 496/536 (93%) 13102.m06353 protein MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed
TAIR PP10 AT2G07690.1 -3 0.0 791 402/539 (75%) | Symbols: MCM5 | Minichromosome maintenance (MCM2/3/5) family protein | chr2:3523379-3527388 REVERSE LENGTH=727