MLOC_10289 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.696963.230752.714581.75674
LEAShoots from the seedlings (10 cm shoot stage)2.976722.994562.072181.6351
INF1Young developing inflorescences (5mm)5.277916.808997.274983.40955
INF2Developing inflorescences (1-1.5 cm)5.802494.150225.275443.99197
ROORoots from the seedlings (10 cm shoot stage)1.197021.179292.608321.03726
NODDeveloping tillers at six leaf stage, 3rd internode4.208165.114115.5927411.9725
CAR5Developing grain, bracts removed (5 DPA)3.816433.458163.187182.34139
CAR15Developing grain, bracts removed (15 DPA)0.3837910.2457240.2040230.507403



CDS Structure of MLOC_10289






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10289.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10289.1NoneAvailableAvailablecontig_1558767 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g40570.1 -1 7e-13 73 31/49 (63%) 13110.m03759 protein flavin-containing monooxygenase family protein, putative, expressed
TAIR PP10 AT1G12140.2 -1 1e-11 68 29/50 (58%) | Symbols: FMO GS-OX5 | flavin-monooxygenase glucosinolate S-oxygenase 5 | chr1:4121386-4123366 FORWARD LENGTH=457