MLOC_10206 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.347072.168562.031551.64639
LEAShoots from the seedlings (10 cm shoot stage)2.843961.321971.735851.56995
INF1Young developing inflorescences (5mm)4.519614.080845.055623.20754
INF2Developing inflorescences (1-1.5 cm)6.766597.185385.498446.30847
ROORoots from the seedlings (10 cm shoot stage)0.7920761.504631.77351.4078
NODDeveloping tillers at six leaf stage, 3rd internode1.559451.647151.143684.57312
CAR5Developing grain, bracts removed (5 DPA)3.18724.251314.320983.17603
CAR15Developing grain, bracts removed (15 DPA)1.539381.065791.620652.70365



CDS Structure of MLOC_10206






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10206.6
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10206.6CUST_8595_PI427708080AvailableAvailablecontig_1558624 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g34610.1 -1 0.0 755 406/616 (66%) 13104.m03363 protein expressed protein
TAIR PP10 AT1G43245.1 -1 1e-71 249 199/641 (31%) SET domain-containing protein | chr1:16308982-16310883 REVERSE LENGTH=558