MLOC_10203 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.060219.305922.356523.6091
LEAShoots from the seedlings (10 cm shoot stage)22.250715.880919.19116.0595
INF1Young developing inflorescences (5mm)22.823230.895130.750925.9414
INF2Developing inflorescences (1-1.5 cm)18.182619.297517.700522.5623
ROORoots from the seedlings (10 cm shoot stage)24.745517.420814.699822.192
NODDeveloping tillers at six leaf stage, 3rd internode15.290417.794422.000158.068
CAR5Developing grain, bracts removed (5 DPA)1.913091.183821.144841.52713
CAR15Developing grain, bracts removed (15 DPA)0.7143090.3657110.3875951.26955



CDS Structure of MLOC_10203






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10203.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371163NoneNoneNoneNone
MLOC_10203.4CUST_841_PI427708080AvailableAvailablecontig_1558612 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g48590.1 -2 3e-91 282 182/266 (68%) 13105.m05176 protein OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed
TAIR PP10 AT2G22670.3 -2 6e-49 172 87/146 (60%) | Symbols: IAA8 | indoleacetic acid-induced protein 8 | chr2:9637136-9638459 FORWARD LENGTH=321