MLOC_10196 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.0313644.509430.43990
LEAShoots from the seedlings (10 cm shoot stage)33.104513.523115.23980
INF1Young developing inflorescences (5mm)36.342728.099424.87760
INF2Developing inflorescences (1-1.5 cm)29.58736.51126.96050
ROORoots from the seedlings (10 cm shoot stage)11.20342.32918.66090
NODDeveloping tillers at six leaf stage, 3rd internode24.445525.02638.729770
CAR5Developing grain, bracts removed (5 DPA)58.091848.008340.64630
CAR15Developing grain, bracts removed (15 DPA)17.161112.330914.65510



CDS Structure of MLOC_10196






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364738
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364738CUST_24814_PI427708080NoneNoneNone
MLOC_10196.1NoneAvailableNonecontig_1558593 (Not mapped)
MLOC_1512.1NoneAvailableNonecontig_1134067 (Not mapped)
MLOC_16812.1NoneAvailableNonecontig_1574562 (Mapped)
MLOC_24961.1NoneAvailableNonecontig_1663475 (Not mapped)
MLOC_28196.1NoneAvailableNonecontig_1899359 (Not mapped)
MLOC_30444.1NoneAvailableNonecontig_2097479 (Mapped)
MLOC_30790.1NoneAvailableNonecontig_212689 (Mapped)
MLOC_31910.1NoneAvailableNonecontig_2233947 (Not mapped)
MLOC_32807.1NoneAvailableNonecontig_23213 (Not mapped)
MLOC_35009.1NoneAvailableNonecontig_24528 (Not mapped)
MLOC_48632.1NoneAvailableNonecontig_327062 (Mapped)
MLOC_53403.1NoneAvailableNonecontig_383308 (Not mapped)
MLOC_65315.1NoneAvailableAvailablecontig_500362 (Mapped)
MLOC_79615.1NoneAvailableNonecontig_85997 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----