MLOC_10176 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.03881650.1669210.105249
LEAShoots from the seedlings (10 cm shoot stage)0.065673600.1239580.0852347
INF1Young developing inflorescences (5mm)0.03457860.11272500.0679542
INF2Developing inflorescences (1-1.5 cm)0.030500300.03908350.0599564
ROORoots from the seedlings (10 cm shoot stage)0.0755763000.0418062
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.03308560.07814890.0791267
CAR15Developing grain, bracts removed (15 DPA)364.109407.912478.265906.039



CDS Structure of MLOC_10176






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10176.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250010.1NoneNoneNoneNone
MLOC_10176.1CUST_839_PI427708080AvailableAvailablecontig_1558560 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g41438.1 +3 9e-165 476 264/402 (66%) 13103.m04460 protein serpin domain containing protein, putative, expressed
TAIR PP10 AT1G47710.1 +3 1e-115 348 188/393 (48%) Serine protease inhibitor (SERPIN) family protein | chr1:17558271-17560061 FORWARD LENGTH=391