MLOC_10155 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.934549.0594711.68658.66507
LEAShoots from the seedlings (10 cm shoot stage)59.036242.136553.066840.9275
INF1Young developing inflorescences (5mm)6.490475.70576.544284.92924
INF2Developing inflorescences (1-1.5 cm)6.8810310.018810.21669.08085
ROORoots from the seedlings (10 cm shoot stage)1.836976.069927.867335.87095
NODDeveloping tillers at six leaf stage, 3rd internode3.803395.702532.1033914.5824
CAR5Developing grain, bracts removed (5 DPA)82.819598.275195.49483.7644
CAR15Developing grain, bracts removed (15 DPA)7.131465.7341610.353915.8555



CDS Structure of MLOC_10155






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10155.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251859.1NoneNoneNoneNone
MLOC_10155.1CUST_833_PI427708080AvailableAvailablecontig_1558520 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g05840.2 -2 5e-166 486 273/319 (86%) 13101.m00569 protein oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed
TAIR PP10 AT5G02540.1 -2 7e-122 372 203/318 (64%) NAD(P)-binding Rossmann-fold superfamily protein | chr5:568609-570720 FORWARD LENGTH=331