MLOC_10142 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.729129.8987311.70496.87925
LEAShoots from the seedlings (10 cm shoot stage)9.9200211.661414.12357.24402
INF1Young developing inflorescences (5mm)6.591186.584139.218994.13305
INF2Developing inflorescences (1-1.5 cm)5.509157.066887.225375.18462
ROORoots from the seedlings (10 cm shoot stage)9.8780412.381614.38229.99913
NODDeveloping tillers at six leaf stage, 3rd internode5.888414.665116.2581712.1756
CAR5Developing grain, bracts removed (5 DPA)6.199714.77035.506643.74667
CAR15Developing grain, bracts removed (15 DPA)3.926723.984695.414056.49234



CDS Structure of MLOC_10142






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10142.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10142.2CUST_11305_PI427708083AvailableAvailablecontig_1558484 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g40030.2 -3 4e-83 261 159/187 (85%) 13102.m04453 protein transporter family protein, putative, expressed
TAIR PP10 AT4G32272.2 -3 7e-53 174 111/175 (63%) Nucleotide/sugar transporter family protein | chr4:15577195-15579689 REVERSE LENGTH=359