MLOC_10132 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.031051.494221.832630.944512
LEAShoots from the seedlings (10 cm shoot stage)8.4654212.440716.67447.29943
INF1Young developing inflorescences (5mm)2.951362.316763.976541.67592
INF2Developing inflorescences (1-1.5 cm)1.739212.167071.2241.44418
ROORoots from the seedlings (10 cm shoot stage)0.8020380.605530.2303980.523664
NODDeveloping tillers at six leaf stage, 3rd internode4.018065.6202612.285516.7715
CAR5Developing grain, bracts removed (5 DPA)1.667132.279181.505721.24259
CAR15Developing grain, bracts removed (15 DPA)0.681390.1511650.9950210.875328



CDS Structure of MLOC_10132






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10132.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10132.1CUST_11304_PI427708083AvailableAvailablecontig_1558472 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g19610.3 -3 6e-27 111 53/61 (87%) 13108.m02043 protein peptidyl-prolyl cis-trans isomerase, putative, expressed
TAIR PP10 AT5G35100.2 -3 2e-23 99 43/60 (72%) Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr5:13360459-13361377 REVERSE LENGTH=245