- Predicted Gene MLOC_10100
MLOC_10100 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.195042 | 0.754713 | 0.563343 | 0.493292 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.796305 | 0.530781 | 0.718945 | 0.559699 |
INF1 | Young developing inflorescences (5mm) | 2.0595 | 2.04334 | 2.4551 | 1.62569 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.33454 | 2.24407 | 2.44088 | 2.26996 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.0627646 | 0.453913 | 0.457828 | 0.421953 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0153674 | 0.00591399 | 0.0100395 | 0.0227664 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.05582 | 1.15479 | 1.24947 | 0.989316 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.295352 | 0.385275 | 0.204695 | 0.63315 |
CDS Structure of MLOC_10100
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10100.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g42354.1 |
-1 |
0.0 |
640 |
306/431 (71%) |
13107.m04420 protein PPR repeat domain containing protein, putative, expressed |
TAIR PP10 |
AT5G39710.1 |
-1 |
6e-69 |
247 |
138/464 (30%) |
| Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747 |