MLOC_10076 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.661547.567338.005726.4079
LEAShoots from the seedlings (10 cm shoot stage)7.8580513.4689.314287.87219
INF1Young developing inflorescences (5mm)6.63149.775959.394456.54397
INF2Developing inflorescences (1-1.5 cm)4.74694.583113.81054.47964
ROORoots from the seedlings (10 cm shoot stage)12.805418.062514.207218.2135
NODDeveloping tillers at six leaf stage, 3rd internode10.454915.56658.8062541.3881
CAR5Developing grain, bracts removed (5 DPA)0.193120.1177410.0931840.119805
CAR15Developing grain, bracts removed (15 DPA)0.4203290.2225040.4291240.741123



CDS Structure of MLOC_10076






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10076.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355967NoneNoneNoneNone
MLOC_10076.3CUST_17878_PI427708080AvailableAvailablecontig_1558363 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g42626.1 -1 0.0 1018 546/699 (78%) 13107.m04457 protein STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed
TAIR PP10 AT3G14350.1 -1 0.0 696 396/681 (58%) | Symbols: SRF7 | STRUBBELIG-receptor family 7 | chr3:4783115-4786999 REVERSE LENGTH=717