MLOC_10075 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.998176.953657.78347.72136
LEAShoots from the seedlings (10 cm shoot stage)4.633882.96484.199743.5075
INF1Young developing inflorescences (5mm)5.412025.233875.151494.63188
INF2Developing inflorescences (1-1.5 cm)5.795275.55795.064996.26737
ROORoots from the seedlings (10 cm shoot stage)3.087094.581124.340435.52689
NODDeveloping tillers at six leaf stage, 3rd internode3.275534.023854.2897113.3368
CAR5Developing grain, bracts removed (5 DPA)5.563445.757776.094545.91133
CAR15Developing grain, bracts removed (15 DPA)2.398761.320552.246764.61307



CDS Structure of MLOC_10075






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10075.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10075.1CUST_8575_PI427708080AvailableAvailablecontig_1558363 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g42632.2 -1 0.0 811 420/555 (76%) 13107.m04458 protein folic acid synthesis protein, putative, expressed
TAIR PP10 AT4G30000.1 -1 0.0 610 299/490 (61%) Dihydropterin pyrophosphokinase / Dihydropteroate synthase | chr4:14670524-14672397 REVERSE LENGTH=554