MLOC_10067 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.188031.372621.346411.32647
LEAShoots from the seedlings (10 cm shoot stage)0.6195640.5855190.2966560.427635
INF1Young developing inflorescences (5mm)3.156872.869623.60782.6921
INF2Developing inflorescences (1-1.5 cm)3.104972.874442.713883.20983
ROORoots from the seedlings (10 cm shoot stage)0.6823581.264121.199711.39257
NODDeveloping tillers at six leaf stage, 3rd internode0.05643510.07761820.2080250.319515
CAR5Developing grain, bracts removed (5 DPA)0.988460.9852030.68250.876411
CAR15Developing grain, bracts removed (15 DPA)0.6152540.6944160.4518561.44767



CDS Structure of MLOC_10067






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_10067.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_10067.3CUST_8572_PI427708080AvailableAvailablecontig_1558345 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g29380.1 -3 1e-75 178 101/225 (45%) 13110.m02513 protein MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain
TAIR PP10 AT2G39760.1 -3 1e-41 98 66/201 (33%) | Symbols: ATBPM3, BPM3 | BTB/POZ/MATH-domains containing protein | chr2:16583213-16585983 FORWARD LENGTH=408