- Predicted Gene MLOC_10028
MLOC_10028 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_10028_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_10028_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.97008 | 0.927463 | 1.1696 | 1.14671 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.4201 | 31.2511 | 21.7732 | 21.5973 |
INF1 | Young developing inflorescences (5mm) | 3.34184 | 2.71047 | 3.20764 | 2.94909 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.19706 | 2.41396 | 3.28502 | 3.54802 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.427259 | 0.335868 | 1.00931 | 0.580545 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.0276 | 17.6063 | 18.1163 | 60.8834 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.10393 | 6.32039 | 6.76159 | 6.90528 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.678868 | 0.986402 | 1.1686 | 2.45176 |
CDS Structure of MLOC_10028
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_10028.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g53490.1 |
+2 |
6e-172 |
492 |
254/326 (78%) |
13104.m05507 protein OsCHL Chloroplastic lipocalin, expressed |
TAIR PP10 |
AT3G47860.1 |
+2 |
7e-134 |
394 |
213/343 (62%) |
| Symbols: CHL | chloroplastic lipocalin | chr3:17656778-17658269 REVERSE LENGTH=353 |