Contig Data
morexGenes
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Map Locations of contig_9995 (1849 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_9995

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_82115 1 415 bp MLOC_82115.1 Available Available LOC_Os09g33510.2, FRAME:+2, EVALUE:2e-43, 13109.m07549 protein hydroxyproline-rich glycoprotein family protein, putative, expressed





CDS Structure of MLOC_82115






Contig Sequence (1849 bp)

>contig_9995 1849 assembly3_WGSMorex_rbca.fasta
GTCTTATTAAGCATACAAACATGGTGCTACACATGCATCATACAATAAACATGGTGCTAC
ACATGCATTGTCAAATTTGTTGACAACTTCAGTTTCTCTTAATGTTCTTATATGCATCCT
TACGTAAAATACTTGGAGTATATTTGTATTGTGGCTAGAGTGTACCCTACCAAAATTTTG
TTCATGACCCAAAAAATGGTCTTTGTTTGGATGTTTGCCAACTTTTTGGCATGCTAATGC
ACTATGGCCAACTCTAGTTCATTATTCCTGCCAATGTTGGCCAACTCATGGGCAACCAAA
ACCACAACCAAAATTTTGCCCAGCCAGTGTTTTGGTTGGACAACCTTGGGCATAAACCAA
ACACACCATTAATGTAGCAATCATTTATTTAAAGAACTTCAGTATTCTCTGTTCCAGGAG
GAAACACACTTAACTAACAAAGATCGTTTCATTGTAGGAAATGAAGCGCCAGTGTGATGA
AAATAGGTATGATGCTTATACAAATTGTGGCTTACACTCTTACCCTGCTGATATTTTTTT
TAATTACTCTATAATCCTTCCAGATAATTGTTCGAAGTCTTGCTAAATGCATAGAAAGAA
AAGGGGAGATCTAAGAATTCCAAAGGTGATCCTGCTGCGTCAGAGTAGTTGAAACAAGCT
CAGGAAGATTATCAAGAGGAAGCGGCTCTTTTTCTTTTCCGGTTGAAGTCATTCAAGCAA
GAACAGTTCCGAAGTCTTTTCACACAAGCTGCTCGGCACCATGCCGCTCAGGTGCACACT
TTATCACTTGGAGATGTTCCTCTTTTATTTTGTTTATTACACTCTTCAGAAACTCATATT
GTACATATTTTGTGTGGACCAGTTATATTTATTCAAAAAAGGTGTCAAGTCTCTCGAGGC
TGTAGAGCCACATGTTAGGCTTGCTGCTAAGCAACAACACATCGATCATCAGTTCAGTGC
ACTTGAAGATGAGGATTACTTTGTTGAAGATAAAAATGATGACGATTACAATGATAGTCA
TGATGGAGAACTGTCTTTTGATTATGGATAAAGTAAGGAAATGCAGAAGCTGGTCATGCT
TCCCATAGTCCTACGGAGGTACTAATATTTAGCTTTGTATATAAGCATAGTTAAATGTCA
AACTGAAGAATAATGTTATGTTGCTTGATGTGGAATTTTTACAACTGTTTCACTGCACTT
GTGAAAAACTGTGCTGCTTCTAGAATTCATCTTGGTAGTTATCTGCAATCTCTCAAAAAG
GAATAACTTTTTGTTATAAACTGAAAATTGGAATGCACATAGTTATGCAGTATGTTACTC
CATGTGTAGAAAAGATCTAAATAGGTAAAAGCCGTCTGTAAACTGAATTTTGTTTCTGTA
CATCTTAAAATTTTCATTTAATTATGTCTAACTTCTTCTGTCCAACATATTGCGGTTTGT
TTCATCAACTGTTCCTCTCCTGTCTTCACTATCTTGAGAGTCTGACTTTCTTATTTTCGC
AGGAATTTTATGATAGAAGCAAATGAGATTATTCCTCTTTTCCTGGTGAAAGACAATGAC
TTGTAAGCCGGTCAGCTCCACTTTTTCCTGGTAAAAGACAAAGACATGCACCTTAGTTAG
AACTCTAAATGATACAGACCTGCACCTTAGTTAGAACATGAGCTTCTTTAATCATATTTT
TCTTGCTACTATTTGAGATGATTTTTGGTCTTCAATTTAGTCCTTTTCTCTATGTGTATG
GTATGAACCTGCAATCACAAGGCAAAGTGTTTGCATAGTACACCTGAAGCTCGGTGTGTC
ATTGATACTCCATTTTGTCTCTAAGGCTGGTGGCGGAGGGGACTAGGAA