Contig Data
morexGenes
Links



Map Locations of contig_99641 (4700 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_99641

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_82053 4 3804 bp AK376061 Available Available None





CDS Structure of MLOC_82053






Contig Sequence (4700 bp)

>contig_99641 4700 assembly3_WGSMorex_rbca.fasta
GCAATGCTGATTATGCGCATGATGCGATGATGANNNNNNNNNNNNNNNNNNNNNNNNNAC
GAAAACGGAATAAAAGGGAAATCTTCTGAATCGTCGGTCTCGGGCTGTCACAGAGCTGCA
ATGGCGACATCAGGACAACTGCAAACGACGACGCCAATGCTACAACCATGGACGTAAAAA
GCTACATCTAATAGATAAAAAAGCTTCAACCAGACTTCAGAATACACAAAAATTACAACC
GTTCTAACAGAAGCTTCATCCCGCGGATGAAAAAGCTTCAACCACATATAGAAAAATCTT
CATCCAATGACTACAAAAACTTCAACCATTTTTAGAACACATGAAATGTTGCAACCGTTT
AGAAAAAACTCCATCCAACACATGAAAAAGCTTCAACCAGAGTTTTTGAGAAAGCTTCAA
CCAGTTTTTGAAACACATGAAATGTTGCAATCGTTTAAAAAAAATCTTCATCCGACAGAT
GGAAAGCTTTAACGATAGTTTTTGAGAAAGTTTCAACCAAAATGTTTTGCAACCAATTGT
GTCATTTTTTGTTGAAACCGACGGTGTCGTGTGCTACAGTCATGACTCAATTTTGTTGCG
AGCGTGCATGCCGAGCTACAACCGGCGACAACGACGGCGAGATGTTTTTTACTACAACTG
TATTTATTTATTGCTACTACCAACAACTTGTTTTGTTGCATCCGTTCTTTTTCTTCCACG
ATGAACTATCCACCGGACGCTTCAGTCGGGATGAGATGTTTGTGGTTGATTTCTACGAGC
CCCGTGGACATCGACGGACACATGGACGAGGGCGGCTATGAGCAGCGACAAGCACGACGA
AGATGGCACAATGCTTCGAGCGGCAGGGGCGGCAGGCGACGACAGGAGACAGGAACGAAA
GACGCGTGGAGAAGAAGAGAGGATAGTGGTGAACGTTTTTTTTTACGAGGATTCAACGAC
CCACACGATCGAGATCCAAACCCTGTGGTACGACCAATTTGGGCCGGCCCACCGGCGCCG
CCTAAAAGAAAAAGGGAAACTTTGATCCCGGTGCCAAACCGCCACCTCACCCACTCCGAT
CGCACGCCCTCGAGCTCGGTGCGCAATAATACCACGGCGGCATCTTCTCCCCTCCCAACC
GTGCGGTGGCTTCCAAACGACTCCTCCGTCACCGCCTCGCCGTCGCCATCACCCCGAAAT
CAACATGCCACCAGCCGCCGCCCCCCCACCCCGCACATGCGCTGCTCTGCTCCCACTTCG
CCTACTCGCTCACGCTCACGCCACCCCAGTCTGGCACTCTCCAGCCGACGCCCACAGCCG
TAACCACCGCTGAGCACCGCTCTTCCATGGCGGCCGCCGACGACGATGGCCAGATCGACG
ACGACGAGTACTACGAGTACAACCCGCACCCCTACGGCGGCGGCTACGACATCTCCGCCA
CCTACGGCGCCCCGCTCCCGCCCTCCACCTCCACGTGCTACCCCATCTCCTCCCCCGACG
GCGCCCCCGCGCGCCCCTCTCCGCGGCCGCCCGTGCCCGCCCCCGTGACTGCCCCTGCCC
CCGCAACGCCGCAGCCGCCACCAGCTTCGCCCCCGAAGCCTCGGCCGGTCCCATCGCCAG
AGCCGGCGAGGACACCGCCCTTTTCGCCGGTTCCGGCTCCGGTGCCGGTCGCGGAGCCGT
TCTACTGGCCCAAGCCGCACGACTACGGGGACGCTCCGCGGTGGCCGCCCGTGTACCCCA
CGCCGGAGGTGTTCCGGCGCTGGCCGTACCTGGCGGCGGGGTCGCATTGCTGCCACTCGC
GGTGCGGGCCGCGCGACTACTGGAGGCAGTGCATGCGCGGGCTGGACTTCCTCTTCGGCC
ACGCCGACGGGTACGGGGAGCGGCGGATTGGGACCGACTGCCACGGGGTCCCAGTGTACG
CCAACAAGAAGGGGGGAGTGGAGGACGCCGTGGTGGTCGAGGTGCCGCCGCCGGAAATCG
GGAGGGTGCAGTGGCACGATGCCGGCGAGGTGCCGGCCATTGGGAATGTGCAGTGGCACG
ACGCTGGCGAGGTGCCAGCAATTGGGAATGAGCAGTGGCACGACCACGGCGAGGTGCCAG
CGATTGGGAATGTGCAGTGGCACAACGCCGGCGAAGCGCACGATCAGAGCAATGTGAGGA
AATACACCGCATCATTCTTCAGTTTATCATGCTTTAGTATACTCTTATCATATTATTAAT
AAATACAGTACGTAGTACAGTATATATCTTCCTTCGTCGGTATTCTATTGACCGATTCCT
TCGTTGTTTTTGTACTCGGAGACAGTGGCTATCTTCTTACGACAACGCAAAAGAGGATAC
ATATGCATATGCCCATTCTACGTATGGCTCGTATGACACGTCTTACCAACAGTCTTACAG
TGCTGATGCTGCTCCGGATGAACCTACGTGGTTTCCCAATCAGAGCTATCAGGATCTTTA
CAGAGAGGAAGAGCCTCGGTATCAGGTACTCCCTCCGTCCCAAAATAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTAGTACAAAGTTAAGACACTTATTTCGGGACGGAGGGA
GTATTTCTCATTTCTGAATGATCCATGTGTCAGCCACTCAACTGACTAGTGAGCAGCGAG
TGACTAGTTGTCACTTGTCACTCTATCCATTTTGCGCAATTATGTGCTGATCTGTCAGTC
AATGGGCTCGCCACAGGAGCATTAGTGTTGTCTAAGTACCATCAGCATATTGACTTGCTC
TGCCCAATGATTAATTTGACATTTATAAAGAGCAACATTAGACTAGAAATGCAAGACGAA
TCAATGAGTTGTATGTCTGAATTCTGAAAGATGCTTCAGTAACTCGAGTAGACAATCCAG
TCCATGATTCATCACTTTCCTTTTTCAGAACATCCATGATTCATTACTTATTATACTTGC
ACCTGGACCTGCCCCTGCTTGTTATATTCACATCTAAACCCCATCTCAGTTTCACACAAG
CGTCCTGTTATGCTGCAGAGAATACTATTTCAGCTCAACCTATATATTGCTACAATCAAA
GCTTTAGTTAACGGACACCCTTAAGTAGTACTGTTTGTTTGTTTAATGTGGTCATATGTA
TTGTTTGTTTGATCTTTTACAGTTTACTGAATTAGGTAGCCACATGCACATCAGTGTTGT
CTAACTATACGTATGCATATATATTTGCTCTCCCTGAATGCCTGATTTACTAATCTTATT
AATAGAGGATCATTAGACAAGACAGACGAAACAAATCATTAATATTTTTATATGTTTGAA
AGAGATGTTCCAGTAACTACCTACGCTATCCTAATCCATGATTAGTTACTTATTACTTGC
ACCCTATCCTGCTTGACTGCTTGTTATCTTCACATCTAAACCTCATCTCGATTTCAATGC
AGGAGGTTTTACCCAGTTATGGTATAGAAAGCACATTTTCATCTCAACCTATTTATTGTT
ACAATCAACACTCTGGTGAACAACCACTGCATGTTGAGGTTGAACCTCCAGAAACATTTT
ATTCTCACAAGTTGGAGTACCACGAGGTTTGTTAGCTATCAATGTCATTTACTTACCTCT
TTCAGTTTTGTGTTGACACATCAGTAGTTCTATACATGCATTTGCTTGTCCAGGCTGACT
ACATTTGTCTCTGTGAAAATATAGTATGCTTCTCTATATTCTCATAATTGCTAACTAGAT
AATGTTTTGATCCTTATGTAGAATTTCTCAACATATACCAATCATATTGATAATTCGGAG
ATATCGTCGCAGTCATGTGAGATACAGCCCTATGCATATGTACCTGACAGTCCAGTGGAA
CCTTATCAATCTTCTTGGTCGATGAATTTGGGATACTATCAGGATTCCACACAAGAGGTG
ACTCCTCAGTATGATAATGTAAGATGTACTCCTGTCACATTTGAGATGCTACTGATACAA
AATTGATATAAGATCCTGTTTGTTTATAATTGTCAATTGGACAGATTATTGGCTCATTGT
TCGGAGTGCAGCTAATATACCTTTTCTTTGTTAACTCATTGTTTTGACTAGCAGCATGCT
TTTGAATCTGGTGAATATGGAGGCATGTCAAGCATATTCTCGTCTTCCTCCTATCCTGAG
CAAGTAGAAGTTTATGAGCAGTCTTATGGTGATGAGTATGTCTCCTTAGAACAAAATTTC
CAGAGCAACTGGAATGCTTTTTCTGAAGACACCTCTGGAATCAATAAATCAGTAAGCATT
AGAGCGTGTATTTTTACTATAAAAAAATTGTCAGTGGTATGGATCAAATTGCAATGCTGG
ACACCTTTTTCTGCAACATATTTTTCCCTGTGAACTGAATGTGCCGGCATATGCTTATTT
TCTAGCAAGGCGGTCCTTTTCTACGAGAACTCTCAGCCATATTGTCTAATGGTGCTATTG
CTATCGTATCTCTTTGGGCAACAATAGAATCATAGAATTCAAGTAGAGATTTCAGATTTT
TCCCTATCGGTTTAGGCAGTAGGGTTTTCGTTAATGTAAATAGCGTTCGTTGTTTAATAA
TTGTAGCTTGATTTTCTGTCTGTGACTAACAAACAGTTAAAATAACTCAGTTTATGTCAT
TTTAAAGATTTAACAAGTTGTGTAGCTTCTTGTGCTTTGCCAGGATTGTTGTAGGTTTGC
AACTAAAAAGTACTCCCCCC