Map Locations of contig_99155 (4658 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_99155

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81960 5 3225 bp AK369516 Available Available None
MLOC_81959 1 1082 bp MLOC_81959.1 Available Available None





CDS Structure of MLOC_81960






CDS Structure of MLOC_81959






Contig Sequence (4658 bp)

>contig_99155 4658 assembly3_WGSMorex_rbca.fasta
CTCGGCATTCCTGCTGACCCCCTCTTCCNNNNNNNNNNNNNNNNNNATAATTTCGTATAC
CATACTTTATACAAAGTTATCCGCCGGGGGGGGCATTTCCAGCCGCACCCCTAGGTTTCG
GCCCCAAACACACATTTCAAAGTTCTCTTTCCCGCTACCAAAAAACGACACAGGTTCGGC
GATCATCATGCCACAGGTCGGCGATCATCATGCCACAGGTCGGCGATCGAACATATAGCC
AAAGTCTGGCGATCAAAAAGGCAGGAACCATAGACATGGAACTCAAATGGCAAGCTCCTC
TCCTGCAGGGGTGGGAAAGCTCGGCGGAGGCATTGGGGCCGCAGTTGTAGTGCTCGGCGT
TGGGTTGGCGGCTTGGCGCTGGCTTCCACTTGACGCGAGGCTCGCCCGGCCACCGGTTGT
TCCTCTTCCACCTCCTCCTCGACCGACATCGTCGTGCTCGACCTCCTCCATGTCGTTGGT
GATGTCCAGCGTTTCCTCTTGCGTGCGGAACCCGGGGCACGAAGTGGTGGCGGCTGAGCT
GTTCGGGATGATCTCGTCCATCTCGGCGTCGGCGCTGCTGAACTGTGGCGTCGAGCTAGG
TGTGAAGTGTAGGGGCCACGGCGTAGAGCCGTCGTAGACGAACCTGAGTACGTCGGCGAG
TAACCGTACTGGGCATTGAGGCCAGCGATGAACACAGAGTGTGTGTGCGGGGAGGTGATG
TTGGGGTTGAAGCCGCCAAGCGCGTCGCCGTCGGCATATTCAGGCAAGGGCGCGTACCCC
CACACTGGCGCCGAGAAGTTGGCCGGTGAGGCGACGCTTTGCTGGCTACCCACGCGCCTT
GTGGGTACTGGCCTGCCTGTTGAGGCGGAAGGATCTGGCACTTGTTCACCATGGCCACGC
GAGACGACACCTCCTGCTCTACCGCCGCGTCCCTGGCCTTCTTCATGTTGAGCTTGTTTC
GTCGATCGCTGGTGATCGCCGCCCGGCGAACAACGTCGGCCTTCCACTGGGGGTTCGTCA
AACCCGGGGCCTTGCCATCGGCGCCCTCAGCTTCGGCGTTGCGGGTTCGGCGGCTAGGCG
AGGGGGCGCATACTTCTTCGGCGGCATGGCAGGCGATTCTGGGGAGAATGGCGGGAACTG
CAGGGGAGATGGGGGATAGTGGGGAGGAAAAGGCGAAAAACAGCAGGAAAATCGACAGTG
CAGCCTCACGCGCCTTTTTGCTTCAGCCGGTGCGGGGGCGCTGGTTTCGGCTTGGGTTCG
CCGGATGTGATTTCGGCCCAAACCGGCGAAAGACGAGGATCTTGGGGTGCGGCATGGGAC
ATTTTCGTTCGCCCGGCGGAAAAAAGGCGCCCTGGGGGTCTTGGGGGGCGGCTGGAGATG
CTCTTATATTTAGGAACGGAGGAAGTATTTTGTTTCCACTGGCTAAAGCTTGGCTGTGAG
AGATGATATATCCCAGAAAGGACAAAAAGTGATGGCTGGACAAATGGTCTGTACCTATAG
GACTGATAGACTTCTTTTGTACTACTAGATAAAACTATGCATTCTGTATCATTTATTTGA
ATGCTAACTCTGAGTAATTGCGCTATGATAGTTCCCAGTACATCTATGACCAATATTTAG
GACGAAGAAAAGAGCTACAGAATCTTAACAGTTTAACTGTGAAAGAAAGCGCCCTAACCT
CTTATGGGGTAATACAGCAGTACTCCATGCATGAAATAAATAACAGAAAAATAAAAAAGA
ATCCACCAAGCGGACAGCCAACAAAGAGACACTACGAAGAAAACGGCACAACAAGGTGTG
TGTTAAGAGGTTTGCATACTTGCAACTCAAACCTTATAAAGTGCTAAAGAAATATTTCAT
CTGAAGTACAGTCTCTAGTTGAATAATAGTGAATAAACATACAATGAGAAGTAGCTATAT
GATGCATCAGAAGCTTCAGAGCATGAGAATACATTGAGGCAAATTTATATTTATTGGAAC
AGAAAAATACCTTATCAAAACAGTAAGGACTAGGGTTCTGCAGCATTGGGATTTTCTTCT
GCACCAAGAGCCAGAACGACTTTCCTCAGGATGGCATCAACTGGCAGATGTGAGTTCTCA
ACGGCCTTGCTTATAGCTTGCCATCTCTCACCATGTTTTGGCTCAGCTGCAATGCATCGT
TTCAGAACATCCTTTTGTGTGTCCGCATTTCCGTGCTGGAGTTCAAATTTGTAGTACAAT
GCCCAAAAATCCCCAATGTCAGGAGCAAGAGTAACAGCTCTGTTCAACCAACTCCTTGCT
TTATCAACCTTCCTGTCATGCCAGAATAGTTTGGCGACAGCTGCAATGACATGTGGATCA
TGATCACATCGCTTTATAGCATCTGAGCTCTTTGATTTGCGTTGGGGACGTGGCACCATC
TCAATAGCTGCAGCCCATAAAATGCCACTTGTTGGGCACTCTTGTAATGCCTTGGCTAGT
AGAGAATCAGCTTCCTTTTTGTTCCCGTGCCTCAATTCAGCTCGAATTGCTGCAAGCCAT
AGTTCAGGTGTAGCTGGATTCTTTTTCCTTGCCATGGTGAGGAAAGCGCGTGACTTACTC
AAGCCATTTATCCTCTCCTCTAGACTAGCTAGTGAGAGCCAAAGAGGAATGCAACCGGGG
CAGTGCTTGAGTCCATTCTCGTAAACCTCCTTTGCCTTCGGTACGTGCCCAATCCGGTCT
TCCATCTGTCCAAGCATTAACCACAATTTGAAAAAGGAGGGGAATAACTTCAGACCTTCC
TCCAATAACCTCCTTTCCTCATTCACATTTCCTAATTCCCTCTCAACAATTGCTGATTTC
ATCCAAACCCTCTCGGTGCCTCCTCTTTCCCTGGCCTTGGTCAAAAGCATTCTTGCTCTC
TCCGGTTCGTTGTTCTCGAACTCTAACTTAAATGCAGCTAACCAGATCTCCTCGGAAATA
GGGATGGCAGCATAAGCTTCCTGAAGGATGGCCCTAGCTGCAGGGACATCACCAGCCAGC
CATTTCTCCTTTGCACCCATAAGCCATAACACTTCAGCTTTTGGATTGTACGTGACAGCC
TTTCTGAGAATGGCTTCAAGAGATTCTCTTGTACCATGGCTCTTCTCAAGCTGCGCCGCT
TTAAGCCATATACTCTTTTTGGCAACGAACACGCTAAGAGCATGTGCATAGATGGCCCGA
GCTGTCTCAATCGAACCACGTTTCTTGCATTCCTCAGCATCAGCAACCCATGTTCGCTTC
CGGTCCTCGTCATCAACCCCAACTCCAATAGTGCTCTTCACAATAGCCTGGCAAGTAAGC
ACAGATCCAGCACGCTCTGCAGCTTCGGCTTCCTTTAACCATGCCTCCCTATCAATATCC
AACCCTTCTCTCTGCAAAGATCTTATACCTCTCTCAATCACCTTGCTTACAGATTGGGTG
TTCCCATTAGCCTCCTCCAGCTTTGCAGCTGTAATCCAAATGGCAGGTTCCTTGTTGAGC
TTCTCCCTGGCCTTGTTAAGAACCTTCTTTGCCTGGTCATACGTCTCGAGCCTTGCTAGG
GCAAGCCACAGCTCGACATGAAGTGGGCAGCACTCCACAGCCCTGTGAAGCAACATCCGT
GCATCCTCCTCGTTCGCCAGCTCCACAACAGCCTTCCACAACCTAACTGAATCAGGAATG
TGCTCCAGCCCCTTCCTTAAAACCCTGCTCTTGTTCAAATCACTGGTCTCTAGTTTTGCA
GCCTGCAGCCACAGCTTCACAGAGTTGGGAATTGCCTTCACACCCCTGGCAATTACTGCC
TTTGACTCATCTGGACTAGCCAACCGGCATGCCTCGAACCAAACATCCTCATTCTTGGGG
CACTCCTCACAGCCCCTCTGAATGAGCTGCCGAGCAGACTGGAGCTTGCCAGCAACCTCT
TCAAGCCTAGCAGCAGCAATCCAACCTGGAGGATGCTTCGGGTTTGTCTGTGTCACAGAC
CTGAGCAGCAGTCTCGCCTTCTTAATATCAGAGATCTCAGCATCGCTAGTAATTTTCATG
CTTTTCAAGTCTGTAAGGTATCCCTTTGGATCAACAACAGTAAGCCCAGAAACTGAATCC
GATAGCCTGTCCAGTTTCAGCGAAAGCACGGTACCACGACCCTCACCCACGGCTGTCAGG
TCAGTAACCGGTGTTTGCGCCCATGGTGTCTCTGTGCCACCAGCGGCACGGCTCTTGGGG
TCCAGTGCTGTGACATGCTCCTGCTCCTGCCGGGCCTTCTCAAGCAGAGTGTCCGGCACC
GGGACAAAGCTCTCGAACCGCTTCTTCTTGTTGCGAGCCGAGTAGTCCCCAATTTCAGGT
ATGCTTTCCCACTCCTGCACTGACACATCGGCCAGTTTCCTCTTGAGATCAGCAAACTGC
TCTGTGATCTTGGGGTTGGACGCACGGTACTTCTCAATCTCCTGCTTGAGGCGCGCCTCG
CGCCGATCCTTGCGGCGCAGGTCCATCCTCTGGTCGATGCTCTCCCAGACAGCATCAGCC
TCGCGGTCATCATCGTCGTAGTCGGCGTTGGAGAAGAGGCCGGCGTCGTTGCCCTCGAAC
TCGTCAAACTTCTGGTTCTCGTCGTATCCCTTCTCCTCGTCGCCGCCTTCATCTCCGCCT
TCGTCCTCGCCTGGGGGCTTCCCGCGGCCGCGGCCGAC