Contig Data
morexGenes
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Map Locations of contig_9900 (2680 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_9900

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81925 3 754 bp MLOC_81925.1 Available Available LOC_Os04g40290.1, FRAME:-3, EVALUE:5e-63, 13104.m03916 protein AAA-type ATPase family protein, putative, expressed





CDS Structure of MLOC_81925






Contig Sequence (2680 bp)

>contig_9900 2680 assembly3_WGSMorex_rbca.fasta
CGCGTGTCCGAGCGTATCCCCGTGTCTGGCCGTATCAGCACGGGGATTCGGCAACTTCTG
CCCTGTCCATGCTTTGTAGTATATAGAATTATAGACGTGTTTTACTGTTTTAGTGTGTCT
GTTCACTAATTTCAGTCCGTATGTAGTCCATATTGAAATATCCAAAACATCTTATAGTTC
ATAACGAAGGTAATACTTCTGATGGCATGTGAAGCCTCCAAGTGATTAACAATGTGAAAG
ATGCTTACCTGTTCCATGAAACAAGGCATGGGTCTACACCTCTTTCAGTAAATAGCAAAG
CACTAGCAGCGTATCTCAGCAACCTCTGCTTGAGACCCACCTCATATAGTAAGCTGCAAG
CACATACGCAATCATCAACAGAATAAAAAACACAGAAATTGTACTGGTCAAGGATACTGA
GATCAAACCAAACCTTTCCCATAATCCATCAAATTCTTTGGCAGGTAGAGCCCACTCATC
GAAGCTAGAGAGAGTGTCATCTTCACTTGGTTCTTCACCTGGACCATCTTCATTCAACTG
CAAGATAACCAGATCAGCTTGAGCCTTGAGGTGTACGATAAATTTGAACCAGATCTTCAC
TAGAATACATGACATAAAGCAATCTATCTCTTGGAAAGAGGTCAGTAGACTAATTTAGAA
AATACCGGTTGTTTCAAGAGAAAACAAGTGTGAAATTTTAAGTGAAAACAACAAAACACC
AGCACCTCAGCAGCATTACGAAGATATCTTATGATGTGAAGATGAAACGATTTCAACATG
CAACTGATTAAAGAAGAAAGATAGCCGGCAATAGCATGTAAACATACCCAAAGACTTTCT
GTGTTTTAAAAGGAACTAGAGGAGATTTAAGCAGCAAAGATTGAAGTGATTTAGGCAGAA
AACATTTAAATGCATACCCGGAACACATGAACGTCAGGTTTGACTTGCCAAAACAACAGG
ATTTTGTGGTTCTCAATCAGCTCATCTACATGAAAAGCAGGCATTCAGGAAGAGGTACAT
AGATAACTGAGATCAAGAAAGCACACTTTCCAGCCTAAGTGAAACATCGTACCAGTGTCA
CATATTTGGATCCTTTTAACATGTTCGACAAGAAATGAATTGTCAGGAGGTATCTGGACA
GGACCATCAACATAGCTTAAACTTCGAGATTCTAACATCCTGATAAGAAAATAACTTGTA
AATGTTGATGAGCAATAACAAACATTAATGTCCTGCACAAGAAGATATCTGCGCAAATTC
AATATGTATGCTGTGAGCTTAAACCCAGAAGCTGTCTACAAGAAACTATGTCAATTCCAT
GGCCTCAGATCTGATTACCACTTTAATATGAAAGAAGCGTGATAAGATTTCTGGCATTGC
TTTGGTGAGTTATCCAGCCTATCAATAAGCAATGATGAACAGTTGAACGTGATATTTTTT
TTAAATGATTGGCTTATAGCTGTTTCCGGTAATCTTTTCTGAACAGAACACTACAGATGA
TACGATTTTTTAACTTCATTTACTGCTTTCTCCATCCTTTGTATACAAGCAAATGATGGA
CGCAGTAAGTTTTGAAATGATCAGCTTATATCCATGTTGCACGGCAGAAATCCCCACCTA
GTTGCTAATCTGTTATAACACTAGCTGATGTTTTTCTCTAAAATGCTAATCACCCTGCAA
TGCCTAATTACTTATTACAAACAATTTAGCACTCCTAACTTTACTAGTTGCCACGTCGAT
CTCGAATATGCTGCATCATGAGCGACTAGTGAACAAAAATGCCTGTTAATTCCTATTAAA
ACATACCCAGCAAACTCCACTGCTAAATCACAGGAAGATTGTTGACCAAGTTCCCTAGAA
CCATGGCACATTTCCATTTTTCCGGTGCCAAACTATATCTGACCCAACCCGCATTTAGCA
GCTCGTGCATCCACGTGTCATCAAGCATCCAAATAACAGTAAAATAAGCCCGAAACAAAG
TTCAATCCGAACAGCACCTACCTCTCCACCGCTGCTCGGACGTCCTCGGCGCGAGCCGTA
CTCGAGGCGTGCAGCAGCACCTCAACTGCAAGCACAAAAGGAAAAAATCAACCCCGGCGA
AACCAAATCGGGCATTCGCAGAGCACGGTTTAGTCATGCGGCGCTAGGAAGAGGCCGGAA
ACGCGTGCGCGTCGCGGCGCCTACCTGACACGAGGACCTTGTCGTCTGGCGGGGTGGGCG
CAGCTACGGCCTCCGCCGTCGGCTGCGACGAGGACGGGGCCGCGGGAGGGGTGGCGGCGG
CTGCAGGCTCCAGGGGTGGGCTGGAGGGGAAGGCGGGCAGGGCGGGATGAGAAGGGTGGG
GGTCGAAGGAGATCTCCATGGGGGCGCTCATGGTGGCCAGGCTCCGCGAGGCAGCGGAAT
GGAAAAGGTCCTAGGGTTTTGGGTTTGGAGAGGGGAGGGGAGGCGGAGCCGTGGAGGAAT
GGGGGATTTGGGGGAAGGAGGAGGGAGGATTTGGGTTTCCCGCGCTTGAGGTACTTTAGG
GTCAGGAGATGGGCTCTCTCTGTAAGCTCTAGGTGGGCCTAGAGACCTGGATGGGCTCAA
TAGGAAACCCATTTTCGACCCAGCGTGCGTCTGTGATCTTTGCTACTTAACGCTCTCTGC
GGTAAATATAGCTAAACCCCTATTCGGCGCCCGCTGCAAT