Contig Data
morexGenes
Links



Map Locations of contig_98821 (5548 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_98821

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81901 2 1043 bp AK249235.1 Available Available None





CDS Structure of MLOC_81901






Contig Sequence (5548 bp)

>contig_98821 5548 assembly3_WGSMorex_rbca.fasta
CGTGACGCAACGTGCGTTTGGTCTCCGATTTCATTGAAATTTTGCAAGGCATCATTGGAT
GTGCATTCTCAAATGCCGGCAAAAGTTGGGTAAATTTCATGCATGCATGCATATACATCA
TGTGCAACTCATCGGTGTTGGTATGGACGGAAGGGGTGCTACAACGCGATCTTACTACTC
CCCTTCATCAAACGGATCCAAAAATTTTCCACGCTTCTTAATGAACTTCAGAAGGAGGCA
CGTCAATTTTTTTAATTTTCTGACTGTCTGTGCTTTTTCTATGAATTTTCATTCAAAAAC
ATGCATAAACAGATGTCGGACGTGACGCAACGTGCGTTTGGTCTCCGATTTCGTTGAAAT
TTTGCGTGACATCATTGGATGTGCATTCTCAAGCGCCGGCAAAAGTTGGGTAAATTTCAT
GCATGCATGCATGCATGTACATCATGTGCAACCAATCGGTGTCGGTATGGACGAAAGGGT
GCTACAACGCGATCTTGCTACTCCTCTTCACCAAGCGGACCCAATTTTTTTTCCACGCTT
CCTAATGAACTTGACAAGAAGACACGTAAATTTTTTAATTTTCTGACAATCCGTGCTTTT
TCTGTGAATTTCCATTCAAAAACAGATGCCGGACGTGACCCAACGTGCGTTTGGTCTCCG
ATTTGCACGCGTTGTATAATGCTCCGACGAAATAAGTTAATTCAATAGTGTTCTTAAAAC
AATGTGTGTGTTCTTTTTTATTTTTATGTTAAGACCGATAATGGTCCTAATCGTGCACTT
CTATTTTTTCATTTTTATGAACTGTTCATATATTAATTTTTTATTTTTATGAACTTTTCA
TATATTTTTTAAATGTATGGAAGGCCAAATTTTTTTAACATATTAAAAAAACGAAGAAAT
AATAATAACAACACTTAATTGAAATAACATAATAAAACTTCGGTAGATAACCATAGTTCA
TTCACGACTTTAGTTCATATTACATTCGAACGTAATAGGACTTTAATTAAACATTACTGA
AACTAAAAGTGAAATTTAATTAAACATTACTAAAAACTAAAAACTAGTCTAATCGGACTC
GTCGAGGTAGACGACAGCCGACCCCTCCACCGCGCCGTCCCCGTCCGCCTCGTCGTCGTC
GTCGTCAAAACTATTGCCGAGGTTGTCCTAGTCGATGTCGTCGTCCTCGACGACGGGCTG
CGGATTCCCCGCCAGCGTCGTCGCCGCCTGAATCGCCGTCGCGATCTCCGCCTGCTCCCT
CGCGGCCCCCGCGGCCGTCGCCTGAGAGGCCCGCAGGGCGACGAGCAGCCCCGGTGAATC
GTCGAGGTCACCGTCCTCGCGGTGGACGACCTCCGGCGGGGCCTGTGGGGTTACCGCCCG
ACGCCGCCGCTGGCTGCCGCCGGGGTTAACGGGGTTGCCCGCGGCTGCGCGCCGATGGTG
GTTGATGACGTCGTCGAAGGACTTACCGTCACAAAAAATGTGCCGGCCATGGATGTTGTA
GCGGCCACCGCGATGGGTCCGGAGCTCCTCCGCCGTCGCGACCGGCCCGAGCGTCGTGTA
GCTGTCCTTGCCGACTCTCCACGGCTTCGCGAGCCGGCACCCCGACGGGACCAGCAGCGC
GTAGCGGTGGAGCTCCTCCGTCGCCGGAGCGTCAAGGCTCGACGACCAAATGCTCGGCGG
GGCACCACCACCAGCGCCGAAACTGCTGTCGCCGGAGTACGCCGTCGTCGGGGGGAGAGA
GGAGCAGCGGGGTGACGGGGGAGAGGAGGAGAGAGGGGGAGCGACGAGTCTGGGCGAGGG
GGGAGAGGCATCGGCTTTATATAGCCCCCCGGAGGAAGGGGAGGCGACGAGGTGGTTGGG
CAACGTTACTCCGGGGGAGTAAACGTGGTCCCTCGGGGAGGCGACGGGCCTCGGGAGACG
GCGACATCCGTCGTTAATGCGCGGCCTCAGGAACCGACGGAGACGACGGACCGACGGGTA
ACAGAAAGCGTCGCCTCGGGAGAGGGCGGGACCGACAGGTAATAGGAGGCGTCGCCTCGG
GAGAGGGCGGAGGGTGATAGGAGGCGTTGCCTCGGGAGATGGCGAATTGACGATGCAGGC
GGGGGTTAATGGTGGCGGCCTCGGGAACCAACGAAGGGTCCGTTTTGACCGCGGTTAGGC
CGACGTGGCGACCGTGGCTGACGCGGATACGACGCGTATCTCCCGGTACCTGTACGTCGC
CCGACCGTCCGTTGGCGCGCACGGGCTGACGCGCGTACGTCGGAACTGGGAGAAAAGATC
ATCCTGCCCTTTTTATGAAAGAGTATCGTTCAATTTGAGCCGTCGTTGTGTCGCGGGGTT
GTACTGAAGACGAAGTGGACTAAAAAACAGTGTTGTGGATTGTTAGGGTGTATTCAAGTC
AAGACTGGTATAGCTAACACCGTTTTGGTAGGGTATGTTCGAAGTGACGCACAACTCATT
ATGGATGGATACACTCATTTACCTCCTGCCACTTCAGTTTCATTTCTTCACAACAGCAAT
TTTGTAAATGAAAAAAACTGTTTTTTTTTGTGGAAGAAAAAAAAAACTGTTTTCAATCGT
ACATGTATGTTTTGGCTATTCTATCATGAACTGGTACTCATCTGTCATATACAGCAAAAT
GCATTTTCTCTGTACAATATAGTATGGATTTCCAAAGGAACCGTTTGCTTGATATCACAC
TTTCTTAAATTGCTGTGCTCATTGAAATTTTATTGTACTTTTCTGCAGATGATGATGATG
ATTAGCTATTCAAAATTCTTTGCCAGTAACTAGGTCAGTTTGCTTTGGTGAAGAGAGAAC
GTAGTTTGGATCATCCATCGTTTTCTTCTGTATGAAACTGATTTTGTTTTTTAGTACGCG
GTACTATAGTACACTGAAGTTTCACATAGGATGTGATCCTTTTGTACTTGATTCGAATGA
TTACCTCTTCTCTGATGCTTTTTTTCCAGTTCAAATGATGACACTGTGAAACATAATTAT
ATCTTGATGCATGGTGCTGACTGGTGGTATTAATAGGAACATGCACGGAGGGGTTAACTA
AACAAAGAATTTAGGGAGGGGTTGAGGGGAATTTAGAGGTGTATTATACCTACGATCCTC
TCAACAAGAAAAATAAACAGTACGAACCAACCTATGATTGGACGGTTAGAGAGGCAGTGG
TGTCTCGGATGGTTAGAGAGGCAGTGGTGTCTCCAGACCACCAGGGTTAAGTTCGGATGC
ATTATTCACGATGCACATTCAGTGGGAGGATTCAATGGGAGAAGACCATCCCGTCAACGA
GGCGTCTACAATGACTCCGTAAATCTCAAGATGATATTCCAACTCAGTCTCTCGAAGGTG
TTCATAGAAGTAAGGTGTGCGTTCATATGGTGAGTGTATGCGCATTTAGCATCATGTTTT
TTTCCTGACACGTTAAATTGCGTTTATTCTATTACTTCTGTTTCTAAATATAAGTCTTTC
TGGAGATTCCAAATGCAAACTACATATGAAGCAAAATGGGTGAATCTATATTCTAAAATA
CGACCTCCGTATATAGTTTCTATTGAAATCTCTAAAAAGAAACACAGGCATTTAGGAATT
ATGACGCATGGCAAGGTGAAAAAAAAGAAAATATTTGCAAATATAAGCACCTTCACTTCA
GAGAAAACTTGTTTGAATGGCCTGAACATGGCACAAAAATCACCTCACGAGCTTATCTTT
CCTACCAAAACTGCGACTTCAGCACTGGTCTATTTTTCACTGACTGATCAATTCAACTTT
GTTCAGTGCATTTCCAACCAAAGACTGTCATATTGAGACAGAAAAAGCTGATACCTCCCT
CCTAGAATGAAGTCCGGGAAGGGCAAGTATACTCAGAGGTTGTTCTCCTGAAGAATTCCC
CATGCAAACAAGGGCTTATTCTTCCATCTTGTCAGTAGAACCAAGCAGATGGGCAACGTC
GGGGGTAACAACTGCGCGCTTACTGACCTCTCCAAGGGCGCAGCAATGATTTTCTCTTGT
GTTAACCGCCACAGCCTCCTGGACAAACATGCAATTTGAACCGGGAGATACCTGGGAAGT
TTGTTTATTGTTAGTGTTGCATGGAAAACAGACACACAAACACAAAATGCAGCACTTTAC
AGTTCTCGTACTCACATCAAACAGTGCATCTCCTATCTTCATCTTCACTTTACCACTCTT
ATAAACGAGTATCTTCCCCATGAGACCTCCTGGCAAATCTTTGATCTTAGAGCCAGGGAG
TGTTTGCCCCCGTGCCACTTTAGAGCTTGTGGCAGGTTCAACATTCTCCTCAGAGCCAGT
ATTTGGTTCTTCAACAGACTCTGTTTGCTTTGGTAAAGGAAGAGACACAGGTAACTGGAA
GAGGAGCAACTGTGGTGTGTCGGACCAATCCTGTCAGCAGAACAGTCAATATAAGAAAGC
AGCTACAGTCCTCTGTTTGTGGTTGCTGAATTGTATTATGCTGTGCTTATATTATAATCT
TCAGTAGAAATTTAATGATAAGAGTAGAAAAACACAGGTGAAATATAACACTAAGATATA
CAAAATCTGGTGGGGCAAATGGGATTATCACAATCCACTGCAATGCCAAACGCAGCCTTA
AAAGGTCAAGCTGTTAGACGCCAGATTGCATACTAATAATATGTAAATTCAAATTTCTGA
TTTTGTTCTAAAGCATAGGACAAGAAATGGCATGTTGTAACAATTTGATAATAAATTACC
ATTAATCCAAGTTCATCTGCTGCCGTAAATTCGCCATAGTGAGCTCTGCTGGCAGAATTC
TCTCCAAACTCCTCTTCATCAAGAATCTCTACATGACGTACAGAGGAGAGAAATAATGGA
CGTCTGAAGAAAAATAATCTTACAACATAAGACCAGAAGGATCAACAGAATACCAGGATC
TCCAGAGTAGGGCCTCCTAAGTGGGAGAGTTATAGGATAGTCGCTATGGGTATAGTCCTG
TAAAAGATGGAAATTAATCAAATGAATAATGCGTGCAAAGGAAGACATCCATATTGGTGC
GCGCTTGGTAAATCCACTCACCCATGGATCGACGTATTCTTTTGGTGCTTTTGGCGCTGT
AAGATCATACAGAACATGCATGAAAAGAAAGGATGTTAAAGCTCCAAATACAACAATATG
TACAGTTAAAAGAGCAATACGTGGTCTGTGTTCCATTCTGAAAGTGAAACAAAATTGCAT
GCCAGACAACAACTACAAGAGTGCAAGGTCTTTATCCAAACACAGTAATATGTACAGAAA
AATAAGTATTCCATATTCTCTGTTTCGTTCAAAAGGAGAAACAAAATTGCAATGCCAGAC
AACAAACTACCAAAAAGTGCAAGGTATTTTCCTTTCCAATTTTCACAAACAGATATTACC
ATTTAGTGGAACATTTAACTAAGGGTTTAACTAAGCACAGAACGATGTAGATAAATATCT
CGGAACAATACCTGCCGAATAATTCCGCGTAGGAAAAGATCTTGCATAGGAAGAGTTCCC
TTGCCCAAATGCAACCTGAGTATTGATT