Contig Data
morexGenes
Links



Map Locations of contig_98500 (5497 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_98500

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81846 4 1223 bp AK372217 Available Available None





CDS Structure of MLOC_81846






Contig Sequence (5497 bp)

>contig_98500 5497 assembly3_WGSMorex_rbca.fasta
CGGTTTTTGCCCAGTTTTCCGTGATTAACTGGGCAATTCTCTTCTGCTTATTTAATAGAT
GAGGCAATCTTTGCCTCCGTTTCAAAAAAAAAAACCAGCTTTATCTGTGAGTCCAAGTCA
ATAAATGTCTCCAGCTCCTCTTTGTCAACGGAAAATGTGTCAGAAAAAATGATGTTGTGG
CATTCCCAATCACTTTGCACAATTTAAAATAAAACAAGTACCTTAGACAAACTCCAAAGC
ACGGCAGCAAACAGACGGTCTCTTTGTCCGGTTAGCGTCCGTTTGCGCCGAATATACGGA
TGTCCATGTTTGGCTTTTGCCTGAGGCCCCTACGCAGCCGACTCATCCGAAAAGGTGACC
GGCCGCGGCCGCGTGCACGCTCGAACCTACGGGCCCGCCGTGTCCAACGGGGCTGCTTCA
GCAGCGCCCGATGCCATCATGGTTGAGGCCGTTAGTCGATGATGCGCCTTGCCACGCCCA
CGCGCACTCGCCTGCCCTTGCCCACGCGCTCGCCAGATCCAGGTCGCCTCATACTCTCAG
GGTCACAGATCTTGCACTACCTTAATAAAGCTTTGTCCTGACAGCCAAACCTATGCCGAC
GACCCTCATCAACATACCACGACCTATACCGACGGCTGCCGGGATACCTTCAGGGTAGAA
ACATCATCGGCGTATATCAAGATATGCCTACAATGCGCGTTGACATAGGGTCACCGTTGA
CATAGAAGTGGGCCCGGGTGCCCGGTGGTAGATGGCGCGTTGACACCGTCAAATATATGC
CAACGAGACTGATGGTGGCCGTCGCCATGGGCTAATAGCTCATGTGCGACGTATTTTGTG
GAAATTGGAAGGAGTGAGACATTGTTCGAGCGAATGGTTGTGGTACGACATATTTGAGCA
CCTAAATAGCCCAGGCAAAACATGGCCCTTAAACTAAACTTATGCCTTCATTTGCTATTA
GGGGATGGACCCACCACTTATCCACGTAAGCACGGGACCCACCACTTGTCCATTTAAGTG
CGGGACCCACCTCTTCGCATCTAGAAGAGACGAGCGTCTGTGCCCGTCCGCCCGCCGCCG
CCCATTGCTTCCCCTTTCCCCAATCTTTCTCTTCTCCGACGACCTAGCGTAGATGTCTAC
CTCCTACGCCACACATTCAAAATGGCAACAATATGGTCTAATGCCTCTCACAAGGTGTCC
TGACTGCCTACGCCGAGAGCCTCTTAAACGTTGAGTCTGTAAGACTGATGACAATGGAAA
CCTTGGGCACGAATTTGTGAAATGCTTGAGCAAAACAATGACAGAAAGGGCTGCCATTTT
CTCTGATTTCTCCATATTTCATTTTTTTTCTCTTCGAATTTGGGATTTAGAGTTCATGTT
GTTGTTTTTAGATCCTCAAAAAGTGTACCCATTCTGAGTGGATAGATGATTATAATGAAA
GAATTCAATTTAAGGGCTACATTGATTCGAGCGGGGCCGCAATCTGGGAGCTCAATTTGG
GCGAGGAGCCGCCGATTGTTGTGGAGAATTTGGGGAGTTCGGAGAAACGGGCGTGCAAAG
TCCTGCCGATGGTGAGGTATGCACGCAATGTTGAACTGCACGCGGAGTCTGAACTGAATG
AGGAGCTGAGGAAGATCAGGAAACATCTAATGCAGATGATCGATTTGCAGAAGCAAGCAA
ATATCATGGCAGGGGGTTCTATTGTTGTATCATTGCTCTGTTTTTCTTTTACTTGTTATT
CAACCATCATTACAATGGGCATTTAGTCCTGTTAGGGCAGAGGACGCGATTGTTACCTCT
TGAGCTTGCGTTGGTTTTCCCTTAAAGAGGAAAGGTTGATGCAGCGAAGTAGATAAGTAT
TTTCCTCAGTTTGTTGAGAACCAAGATATCAATCCACTAGGAGAAACAAGGGAGGCCCCA
ATAGTAGTACCTACACANNNNNNNNAACACTTGCACCCAACACTATAAAGATGTTATGGC
GTCCGCAAGACTATTAGTTTCATTGAGATAGACCCTCCTAAAGTACGTAGCGTACTAGCA
CAAGTAAAGAAATCATTGAGATAGACCCTCCTAAAGAGTAGTAGTTGTAAAAAAGGGAGA
AAACATAAACTGCAAATAATTAACCCCTGTAGCACATCCATCCACACAATTGGAAAAGAA
AAGTACACAACTCGCCTAGTTTTTTCGTATCCACACAAGAACAAGTACAATACCAGGTTT
ATAGATTGTTCACATGGCAAAAAAAATATGTGAACGAGAGATATATGTAAAAAGTAAGTA
GAATGGACTTTCATGAAAGACCCTACCTCCACGAAGCTCCTGGGCAAATACGGTAAATAA
AAAGAAAGAGAAAGAGAGAAGAAGAAAACAATATACGGATTTAATAGCCGAACATACTTG
CTTGATTATAGTAGTAGATAATTATAGATGATATGGCAATATTATATGACTGATAGTTAG
TTGTGTTTTGAACGAAAGTGACATTTAGACGGGCTATAGGCCCCATGTCATACCAGTGTT
GTAGGCGAAACTCATGGATTTGCGAGAACGCTATAATTAATTACGACGTAATCCTCCGTC
TTAGAATATAAAAGCGTTGCACAAAAAATGGGACGGTAGTACTCCCTCCGTTCTAAAATA
TAAGACCTTTTAGAGATTTTATTAAAAGACTACATATCATTAAAAGACTACATACGAAGC
AANNNNNNNGAATCTATACTCTAAAATATGTCGATGTATATCCGTATGTAGTTCATAGTG
CAATCTCTAAAATGTCTTATATTTAAAAACGGAGGGAGTAGTTGACACCAAAATGGGAGC
AAACTGCAAATAATTAACCGTGGAGCACATCCATTCACACAATTGGAAAAGAAAATTACA
TGGATCCATAAGTAACATGCTGGTTGTCAGCGCGCACTAATTCATCCTTTATTGAAATTA
TTACTTGGCCATCAGCAGACGTGATGCCTGCCGCGAGCAAAGGTAGCTAGCTAGCCGATG
TGAGGAGTGGTCGCGACAGTGTCAACGAGGATGCGGACACGGTTGCTCCTCCAGTCTGCG
GAAACCACGGAGTCGGTAGGGTGGACTTCGATGTCCACTTCAGGCATGTCCTTGAGGATG
ACCTCCCTGGCGTCCTCGATGGACTTCCCCACTAACTCCGGCCATGACGACTTCTTCTCC
TCACCGGCGGGTGCTTTTGGGTCAGCGCAGCTCATCCTCGATTCCTTGAGCTGCAAAACA
ATTGATTGAAATAGTTCAGTTCAAAGACTACAGATTGTTGTTGCCAACCGACAACCCTAG
CTACCTCTCCTTCTCAACTCACTCGCTCGAACAAGAAAGAAGGAAGGAGATGAACACAGT
GGACACAAGTTTATCCGGCCGGCGCACGAACGCCGCCATGGACGCACGAACGCCCGAATC
TTTTTTCTCTTTGCATTGTCTACATGGTGCTCAACTCAGTGCATTACAGTCATCCCGCGG
TCTACAGAATTTATACCCGGGCTGGCGCACAACGCACAGCCCACCCCGTCCGCAGGATCC
GCATGCCCCGCCGCGCGCGCCCACGACGCGCGCGCCACGGCCGATCCCAACGGGTCGCCT
ACCTAGCCAGCTAACTTTCTCACCGAAATGTACGCGCCCATGCGCGCTCGTCCGACGACC
CAGCCAAGCCAACAAACTAGCTAACTAATCAGGGCATGCAGTAGCAGAATCACACACCCA
TGCACACAGATCACACACACGAGCACATACTCATGGGTGGCTTATTCCTAACACAGATCA
CAATAACATTTAAATTACGGTTCAGACTACAAATCACAGTGACGCTAATGCTAGCCATCT
TGCTCTAGGGACTCATGTACATAAATCATATGGGACTGGGAACTTAAGACTACTCACCAG
CTAAATGGGATCGAGCTTACCCTGAACTTGACTGATACGAGTATTTGCATAACCCATTGC
TTGTATGCCTATTTATAGGGTGCTCCCACATGTATGCTGAGTTGCTGACAGGGCAGGAGT
GAAGATAAGATGCTCTCACACACATGCAGGCGTGGAGCACGAGCATTTGTTTCGTTGCGC
TAACTTGGCGCATATACAGAGAAGATGCTCTCTCACATGCATGCATGTAGCGTGCGTGGT
ACACGACGCGGTGGCTGCTAAATTGGCCGCATCTTGATTTCGTTAGGCTCGTTGTAATGG
GTAGTATCATATACTAATATCATTCATATGATACTAGCATATGACACCACATCCGTAATA
CATAGTATCATATGTTACTATCATAGTGTAGTTCATTTATTGCCATACAAGACACATAGT
AGCACATCATTTAATACGATACGGTATGATGATATGATACTCAACCCTCTCTTTCTTCAT
TTAATTCTATGCCACCTCATAAAAAATGCCTAGTTGACATGTATGATACTACCTATGATA
CTACCATTATACGGACAGCCTTATGGATAACACGTATGCTGAAGAAGATGACAACGTACC
GCATGATTCACGGGCTGATCGATCGTGTAGATCATGTGAGAACGGGCTTCATTGATGAAA
AGGTCAAGACATGAGTATCTGACTCATGCGGGCCTGAGCTAATCTTACATTTTCAAGAAG
TTATCCCAATTCTCTTAACATGTAAGATATCCACCTTAACATCCCACAAAACAATGCATT
TAAATTTTCTCTCCCACTAAATCATGTAAAATCTGCCACATAGACGCTTTTAACATGCAT
AGTGTTCACCTCAATGTTTCACTTAGTCATGCAAAGTCTGTCACATAAGTGCTCTCAATA
TGCAAAATCTGTCACATAAGCGAGTTATGCATTTATCTTATAAATTACAATTAATTTTGC
ATTATCTTATGCATGTAACCATAGCACACCATATATTCATGTTAGTCATCCTTCACATTT
TTGTTCGAAATAACATTTTTAATTGTAATACAAAAGTTTTTATTCTATTTTTAGACATTT
TCTTTTATTGAGTTGTAAGTTTATACTTCCCTTTCATTAGAGTTAACAACTACTTACGCA
TCTTTTCAGAAAGTTACTGCACCAACGCGCGGGGAGAGAGTCATCCTCACTACTCATGTC
CAAATTTCACTCAATGAAGAAGACACCCGGTCCAACGAATTTTAAATTCACATTATGTTA
CTTATGTTTCAAAACTATTTTACAACAATAAATTAATAAAATAAAATAATTTTTTTTATG
TTTATATTAATGCTCATATATTTAATTGCAATATTCACGTTCCATATAACCAAGTATCAT
CTAAACATATTGCCATCAATTCCTACAGCAACCCGCGGGAAATTGTCTAGTTCCAATTAT
GGTCGCTCCTTCTCTTTCCCCTGTTTTGTTTGTTCAGTGACAACTCCTTCTGCAGTTTAT
CCCTTGTATTTGTAACAGTGAGCCTCAGCGTGGATATCGGTTTGGCTTTCTTCGTACAAC
GACATGAAGGGCTGAGTATCTTTCTTGGTGGCCGGAA