Contig Data
morexGenes
Links



Map Locations of contig_98138 (3407 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_98138

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81775 1 1640 bp MLOC_81775.1 Available Available LOC_Os01g04570.1, FRAME:-2, EVALUE:1e-69, 13101.m00414 protein Ser/Thr protein kinase, putative, expressed





CDS Structure of MLOC_81775






Contig Sequence (3407 bp)

>contig_98138 3407 assembly3_WGSMorex_rbca.fasta
AGATATTGCCAAAGAGAAGGGGCTGGCACAAAACACAGCTATTTCTGTCAGCTATGCCTC
AGAAATTTAGAATCAGCAGATCATCTTTTCTGGAAATGCAACGTCGCAACAACAGTATGG
GGGGAGACGACATCTCGCATAGGATGCGCCTCACTAAGCCCAATAATTTGGGCCCACAAC
AAAACAGCCAGAGAGATCATCACCAAGATGATAAGCAAGGCAAGACCAGAGTACAAAAAA
GGAACCAAGACAATGATCGTGCTCGTTCTGTCAGAAATCTGGAAAAAAAGGAATGAGTGC
ACTTTCGGAAACAAAACAACAAGAGCAGCAAGCATATCGACCTCCATCTCAACAACTCTC
CAGTCTTGGAGGCAAGCAGGAGCAGTTTTCCTAAAGCACCCGTTTGGGGAAATTACGTGA
GGAGTACGGCGTCTGTGCCAGGCTACCTTGTTTTCACCATTTTTTTCCGAGGTTTTCTTC
CTGTTATGTCCTTTTTGATCTTTTGATCAACCCCACCCTTTTGTATTCCCGCCTTGCTTC
CTGCTATCTAAATATATGTCAGCCAGCAACTGGATCTTAAAAAAAAAAAATCACACACGT
CTCTGATCGGGCGCACCACTTTTGGTTTGTCGTAGGGTTGGACTATGATGACTAATTTTT
GCATATGATACCACCACCACCAACGACGTGCTTAGCCGGTTAGCCGGGCCAAGAAGAAAA
GCCAAAGGTGAAATCTCCATGGGGCACTACCTACGGAGAGGATCGGGACGGCACTAGCTA
GCTACCGCAACGACAATCGACTAAAGGCAACGAACCAAGGAGGAAGATGAGACTAATCAA
ACAAATGTGACGATATGGCCGTCCGCGTCGGCACGCGCTGACTGGTGTACAGTAGAGTAG
AGGCAAGCAAGTGGCGGCGTGGGCGAGCCAACTCACCGGCGCATGTCGGGCCGTGCAGCT
TCCCGTCGGCGCAGAGGCACGCGAACGTTGATGTGGTGTTGCTGTACCGGCACTGCCCGC
CGGTCTCGACGCAGGCGGGGCAGTCGCCCGTGCCCGCCCAGTCCAGCAGGAACCCGGCCT
TCAGCAGCCGGGTGTAGTTGGCCGCCGTGGACACCGCCGCCTCCGCCCCGAGCACCGGCT
GGTAATTGTACGTGCAGTTCCCGGCGTTGATCGCCGGAGGGATGTCCCGGTCGTAGCTCC
CGCCGAGGTACGCGACGATGGGATTGCCGCCCGCGCGGCTCCGTCCCTCTGCAGTTGGAT
AGGAAGCACAGGGCCTGGTTGCTGGGGCTGATCTTGAACTGGCTGAGGGTTAGGCTGGAC
GAAACGTTGAAGTCGGCGCGGCACACACCGTCGGTGCCCGTGGCGACTCTGATGTGGTAG
ACGACGAAGGACCGGGCGGTGTAGTCGATGCTGTGGACATGGATGGGGGAGCCACTAATG
GAAGCTGTGGTGTTGCCGTTGATGCACCAGAGCTGGAAGGCCGGGTGGCCGCAGGAGGGC
TCCGACGGGGGGCGGCTGGGCGCGCCGAGCCAGAACGGGTACTTGATTGTGAAGTTGCCG
CACGCCACAGGCTCGCACACGGCATGTGCATGTTGATGGAAGAGGAACAATGAGACAAGG
ATGTAGAGCAGTGAGAATGGATACATATCAGCAGTCTGAATTGAGGAGACTTATTTGGTA
ACGGGGAAGGATGACGCAAACTCGACACATAATATGGAAGGACAAAGATGAGGAAGAAGA
TAATATGAGTGATATTAGCCAACTACTTTGAGTGGTTCTGTGGACGCATTTACTTATCCA
TACCCACTAGAGAGAGTCAACATCCAAATATCTGAACCCATAGGGCCTATTTTGATTCAC
AGGATTCTCAAAACGAAGGAATAACAAAAATGCAGGAATAGGATGGCATGTCCTATAGTC
AACGAAAAAAATAGTGCGCTATAACGGCATATTAGGAAAGCAAAAGGTATATTTTAGCAA
ATTTAGCCGCTACGGTGCTATTCGTGTAATTAGCGCGCTACATGACGCTATAGCGTTGTA
GCGTGTAGCGTTATAGCGTACACATGATGAAAGTATTCAAAAAGAATAGGAAAAACGAGG
CTACAACCCAGCGGGTAGATGTAGAGTCGGTCTTCCATGTTTGAAGATGATATGTTAAGT
AAATTGACTAAAGTTTAGATTTGGCCTTTATGCATATATTGCACTTGATAAAAAAATTAG
TTGTTGAATACTATATTCCTAGGCTTATTTGTCTTTTTTTTCAAATGTTATTTTGAAATA
TAGCACACTATTAGCATGCTATAACTTGTGTAGCATTTGAAAGAAGGGCCTCGCTATATT
TTGTAGCGCGCTATTTTTTTTCGTTGCCTATAGTACCTACAGAATACGAGTGAATGTTTG
ATAGCGCAGGAAAAACAAAGAAAATCTATAAAAAAGTTTGAGTGGATGAAAATTTTCCTT
CAAAATGTAGTACAAATGGATCCTATGAAAGATATCATAAGGATTTCAATCCTATGAATC
AAACGAGCATGAAAGGAAAAAAATCCTAAAGGTCCAAATCCTTCAAAAATTCTATGCAAT
TCCTTTGAATAAAGGAGCCCTTAGTTGGTGGAGTGTTCCACTGTTTTGGTATTTCCACCA
TTGAATATGTTGCTATGTTTAGACTTCGTGAACATAGGAACTATTGGAGATAGATCTGGC
CATCATTTGTGTGGGCGATGAATTTTCATCACAAGAAAAATAGACAGAGGTGGGAGACAG
GCAGAGTCAGAAAGAATTCACTGGTTCAGCAGAACACCACGGACAGGTCTTGAGTCTTGA
CATATGTTACAAAAATTGTCAATTTGCATTTAAAATATGTTCATCATATATTACGAACAA
ATTATTATATTAAAAAAGTTTAACTTTTGTAAAAAGAACCCGGGCAATGAACAAGCACAA
AACACACGAAACAGAAAACTCATGGATGAGAGAAGCGGGAACTAGACAAGCATGGTGTGA
AGATTATACCACTAGCAAGAAGAAGCCAACGACATCAATTGGTTTTGCTGCGAGCCACAA
AAGGTGACACAAATGTAGGACAAATTCTCTTGAATTATTTTGTCTAAGAACAACTCCAGT
AGATCCGCTAAAACCCTGTCCCGCAAAATTGATATAACTGCTGCCCACATTTTTTTTGTG
GTACCACGAGGACTCCGGTGCAATAAATCCTGTAATAGAGCCACTTTTGTGTCCCCTTCG
GTCGCTCCGGCGAAATGGAACCTGTAAAATGCCAAGAAGTAACATACAACTAACTAATCC
CTCCGTTCCTAAATATAAGTCTTTTAGAGTTTCCACTAGAAAACTACATATGGATATATA
TAGACATACATTAGAGTATAAATTTACTCATTTTGCTCCGTATGTAG