Map Locations of contig_98073 (9492 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_98073

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_81757 2 5414 bp MLOC_81757.1 Available Available LOC_Os01g67170.1, FRAME:+1, EVALUE:0.0, 13101.m07284 protein expressed protein
MLOC_81758 4 1087 bp AK364745 Available Available None





CDS Structure of MLOC_81757






CDS Structure of MLOC_81758






Contig Sequence (9492 bp)

>contig_98073 9492 assembly3_WGSMorex_rbca.fasta
ACGAAGTTATTACGCTTGGTGCCTCATCTTGATACTCCTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTATCTCTACTTTGATGCATCACCCTTTCNNNNNNNNNNNNN
NNNNNNNCGCAAGCTCAAGAAGTAGCAATTCCCAAGGACACTACCAACTCTACTTCATAT
ATTGCTACCACAACTCTAAGGATCCTTATCAAGTTGATGTGAGTCCCCAAGAAGAAGAAC
TAGAGAAGTTCCTGAGGGGTGGTTCCGCCAATGAAATTCACTCTTACTCATTTTGGCAAT
AACTATATGCAACCAACTCCAACTGTCGTGGTTTTGTCACGNNAGATGTCCTCATGAAAG
GACTTGGTGGTGAATCCATCGCAGCTATGTGGCGACTCAANNNNNNNNNNNNNNNNNNNN
NNNNGAGTTTACCCAGGTTCGACCCCTCTAGTGGAGGTAAAAGCCTACGTCCTGCTTTGT
GTGTATTGATGCGTCCACTAGACTGTTAGGCATTAGTTCAACAACATCTAAGAGTCATTG
TTGATCGCCAAGGCCGAGTATGTGAAGATCTATAGATCGCATTGGAGATCTACCGAGAGT
TATTGGCCGAAGTTTGAGAGACTTAAGATAAGGGAGAATGGGGGGAAGATAGACTTTCTT
CTGTGTTCATTCACAAGTCCATCCAACCAGATGTAGCATTGTGCCAGTAGTGTGGACTGG
GCGAACAATTCTTGAGTCGCCATCGGGAAATATGGTTCTTGTACTTCCTGCATTTACTTT
TTGTATTTTTCCTTTGTTTTCTAAGATCTTCTCCCCCCTCGAGGGGGAGGGGGGAGGGGG
TTCTCTCTATGACCAGTTCTTCAAAATTGTTAAGTGTTTACCTACTCGCTATGTTGTCCT
TAGTTTTCCCTCTTGTTGTACTTCAGAATGCATGCATATGTCTATCGTATGTTTTGATAA
TTTTATGACTTTATCTCTATTGCATTGTTTTGTTATTTCTCTAAGTATGTAGTTGTTGCA
ATTCTATCTTTGTTTAGTTTCTGTATTATAGATAATTTACATTGTGGTTCTTCGATAAAC
TTGTTTTTCTCAAAGAAACTTTCAAATTATCCTATTCAACCCCTCCCCCTCTAGTCAATT
TCTAATCATAAACCTATATACTAGTACAAAGGCACCACCATGTCAAACATATATTTCATA
TCAATCATACCACCTTATTTACGCCGTAAGAACAAAACGAAACTACTCATCCAATGTATA
AGAGATGAAAATAGCAATCTTTATTAACATCCTCTTCGGTATCAGGTGTTTCCCACTCTC
ATACTGAGACATGATGGATGCGATGGTAGGGATGATGGTGCCCCTGGTTGTGCTTCGAGG
CGCTGAAAGTGAGGGGAAGGAGCCACTCTTCCCTCTTCTTCTTTAGAATTATCCTCTGCA
TAGAATGGGTCTTTCCCCTCTCGCTACCATAGGTGTAACGCCCAACATGTGATCCTAGTC
TCAATGAAGACTTCGAAATTCTTGCTAAGGCTAGAAGCGCATATTGGTCACCCCAGCATA
TGACTTCATAACATACACACATTGTCATATGCCGGTGAACAAAAGGTGGGATATCACAAC
AAGTACAATTAAACAGGAAAGAAGAGTTTGATACGAGTGAACAATAGGGCAAACATATGC
CAATATGATAACATGGTTATACACCAATTAAAGGTCGCGTGGCCCAATATTACAACATGC
AGCGGAAGAATGAGAACACATGTCCGAGTACAGACAAGAACCAATGTTGCCTAGAGAGGC
TAGAACATAAGCACAACGTCCCATAACCAACGGGTTCCACGCTGCCGACCGGGACCCTAA
TCTCTACTACATGTCATTGAAAAACGTACCATGCTCTCATCCTAGAGCAAAGCGTTAACT
GAACAAGTGAATATGTACCTACACCCGCGGTAGTTTGGATGATGGGATTTCCATTCCATA
CAGTGGCAAGATGTTTGTGGGTTTCAAGAAGGAAGGAAAGCAGATGGATGCGGAGATTCA
CCGCAAGTACATCTATGAAGTTCATGTTTCTAACCAGATGGACCAAGCCCTCTTCGGCTG
CGCTCACTAATGGTTGAGACACCACAACCTTGGCCAGCTATTGTTGTCTACGTGCCCTGA
CCGATGGCCTTCCCAACCGTGTCATCCCCCTTTTACGGACGTGCCTTGGCCACCACTCTC
CACCCGGCAGCTACAACATTGTTTGGGTTGCCCATGCCACTCAGCCTCGTGCCACCGCCT
ACGACATTGTTGGGTTGCCCATGCCACTCAGCCTCGCGCCACCGCCATAGTATAACTAGG
GCTGGGATTCGAGAGTTAGAGAGAGGGTTCAAACGGGGGAGAAGGAAACTTTTCAGTCGG
TCGGTCTTCTCCTCTCATTTGTTGTTGTTAACACGGATAATTTAGTGCATGGAACAAAAT
ACCGATACTGACATGCCAAATAGACAAAAGTGTAACGGAACCGACGGAAATGCCATTCAG
GGAACAAAATGTAGATGCAGTGTCAAAAATGATTTTATTTGTTTATTTATGGGCCAAATA
GGGAAGCAGACTTTGGAGAAGACCAGATAAGGAATTCTTTCTAGTCTAGAAAAAAAGGGT
TATGAGGATTATGAACAGCAACTCCCGACCGCCCTGATCCCTGGCCCTCCCTCTCTCTCT
CTCGCCCGGATCCTTCCCCGCTGTCTGGTTCGATACAATTCGTTCCTCCCCCCATCGCAA
TTTGTTGCGCCGACGGCGACGAGCCACGGCGCCCATGCCCTACTGGCGTCGGCACCGGAG
CGGCGCTAATTGATTCCCTCTCATGTTGGCATAGGTAAGGAACCCTAGCTCCACTGGCTG
GATTTTGGAACCATGAGCTCGCACTGTTTCTGAGGATCTCCGTTGAGGGGGCTAGGGTTC
GACGCAACCGTGCTTTCTCCTCCCTTCCGTTCGTTGCCGATTAGTTTGCTCCGTGTGGGC
TTCCATCGATCCATTAGGTTCCTCTCCTTGCCCTTCCAAGTTCGATCCCCAAGGGCTTAG
TGATAAGTTGTGGGCGGAGCTTATTTCCCTAAAAATGTTGGGGGGTTGAACTGAACTGAA
CGGAAGCTCGTTCTTGACCATCGGTATACTTGTGACCTTCAGGTTGTCAGAAATCACCAG
CAGGGAAACAAAATGGTTCAGCTCTTTCTTCAAGTGCCGGCAGACGAGGGCAGTGTTGAT
ACAGATGCTGTGAGAGCGAGGAGATCTCTGCTGGACAAGGCCGAGTCTGTGATCAAGTCG
GTTGTAAGGTCTGGCGGCCGGTATGAGGCTCGGATGTGGCTGTGCAGTACGGTCTCGTCG
ATTCATCTGCTCGATCCGCGTGACCAGCGGGACCTGTTCCTCGATCTCCTGGAGATGAAG
GACTCTAGGCGCGACGTTGCCGCTCGCCTGCTGCGGATGATTTTCGACAAGAAGCCTGCC
AAGGCTGGCTCTGTTTTAGCGAAAAACTGTCATATGCTGGAGAAGTTTTTCGAAGGCAGG
TTCACTAACTACTTGGTTCTCTATGTGTTCTCTGCTTCTACTCACATAGGTTTTACTTTA
TTTTGCTCGCTGCAATTCACCAGTTTATGTATCTAGTATCCAGAACTTACTTTATGTAGT
TAAATATATTTATAGATATTATGTTCATATATATCATTAGTTCATTCGTTATGGTTCAGC
AAATTATCTGTTCAACTTGTTCATAATGGTTCAGCAAATTAACTAATGCCCATCGCTTGT
GGGCATTGCTTCAACAAGTTAAGTGTACGTCACATTAGTAGCATATCATGGCATTACAGT
AATTCACTGCCATAAACTAACAGAAAAAAATGAAATTATGTTTTCATTACATCGTTACTG
TAACACCGGCCTCTCTGCCCGTTTCTACGTGCCTTTGGGTAGTGATCACTTTTCTGATGT
GGTGTATTTCTATAGTTCATCAAGAAACATCTTGGAATTATTAACAGGAATTTGCATATA
CATATGCTCTTGCAGAAATGTAATTTTCTAACATAAATAGTATGTTATGCTCTGCCTGCC
CTTCACTCAAAATCTATTTACCTTTTTGTGCTGGACGGCTTTAATAAAATCGCAATCAAA
TTAAAAAAAACATGTTAGGGGTTAGAGCTTAGATATAATATTGTTTTGTCTTTCATTATG
CAGTACAACATAATTTAGTTCTGATGCCATTTCTTACATGTGATCTATCATTGCTTACAT
TATATATCATGACCTGCAGGAAACCCTGAGCGGATACTGCAATGGTTTAGCCACTTTGCT
GCTACTGGGGAGTCAGCACACAAAAAGGGTGCTCGGGCACTTGCTCAGTTTGCATTTGTG
AATCGTGATGTTTGCTGGGAGGAGCTTGAGTGGAAAGGCAGGCATGGTCAGTCTCCTGCT
GTTGTTGCTACTAAGCCTCATTACTTTCGTGATCTTGATGTTCTCCAGACAGTGGAAAAT
TTCCTTGAATATGTCCCAGACTTTTGGTCTTCAGAAGAGCTTGCTGATTCTGTCAAAGAT
GGTGAAATACTGCAAATTGATACAGAATATTTTGTAGATCAGTTTGTCTATTTGATGTAT
GAGGGGAATTTCAAAGATGTGTGGCAAGTAGTTGAAGATTTTCTGATGGAGGAGCAGTTT
TCCACTCTGTCTCAGTATATTCTTATTCATCTTGACGAACAAAGGCTTCTTCGTTTCTTA
AAAACATTAGGGAAGTTCATCAGTCCGAATGCACAGTGCAAAAAGTTAGCATTCCCATGC
TGCTGGCTTGAGGTTCTTTTGTCGGCACATATTGATCAAATATCTCTTGATGAACTTATC
CTATTGAACTGTGTCATTGTCAAGGGTAGGCAACTTTGGCACCTCATGAACGACGAAGAA
CATGAGGAAGAACGAGGGAGGATGGACGAGGTTGTGAGGACCATGAATGACTTGACTGAT
GCTGATCACTTTGCTCTCATAAAGGATTTCATGGGTACAAAGTTTCCTGATGCACTTAAG
TGGATAGGCATCCTGTCCTGGGTAACTTTCTGTGGTTTGTCAAAATTATGCAAATCGGCT
GATTCTTGTGAATCTCTGTTCACTGGTAACAGCATAGAATTTCGCAAGGCTTATGATTAC
TCATTGGTTCAGAAAGATGGGCACTCAGTTCCACATACTTCAGATATTGATGAGAAGGAT
CCGACTAGAAGTAGCCATAAAAGAAGGAAGAGAGATAAAAAGAGAAGACGACATAGATAT
GATTCTGACGAGGATAATGTTGATGAGCTGCTTGAACTTGGAACCTTCACTGGGAAGAGG
GCTATTGAATCACAATGTGGAAGCTGGTACCTGTCAACTGATGATTTCTCTGCTCCTTGG
GACATTGTATGCTATCTTCTTGCCTTCCCTATACTATTTTAAGTTATCAACCAATGTCTT
CACTAGACAACTCATCGGTTTTTATTCGTATATTCATGGCTGTCATCTTACTCATGCAGG
CCGACATACCGGATCACATTTCTACTCGTTATCTTAGAGTATGGCTGAAATGGGCTTGCT
TTAGATGATCCTCCTCCTTGTGACGCATGTGTGGCAATCATACTAGCTTTTATGGTGAAG
TAATCTTTCAGCATGGAGCTATTTATACATGCATTTTCCCACATGCCATGTGCAATCTTC
TGATCATGCATCCTGATGGTGAGTGATCGCTTCCTATATGTCCTACTTGTTGAGTACCAT
GGCATTGACTTTTCTGTAAAATGCTCAAGTTCACAAAGTCCCTAAACTCTAGAACCTGTA
GTTTTATGACTTCTGTATGATTTGAATGATGCTTCATGTGTTTATCTTATACTCCATAAT
ATCCATGTGTCGTTATGTAAATTGCACATACTTCCAGCATTGTTTTACCTCCATATGAAG
CTACCCTCACCTCTGCCACTTCTTTTTTTGTTTTGCAGATTCACGCATTTTGGATGTGTT
AACTGTGTGAGTTATAATGAGATCCAAAACACAATGTTTCCTGAAGTTCATCCGAGTAGG
TTGGGGCCGATGGAAATTCCACCCGCATGGACATCAAAATAGCTCAAGTTTTCCCCTGGA
AACAAGTTTAAATGCTGTTTTTGATATTACAGATCTTAGTGTTGACTACGGGGTGGTATA
AACTAGTCTGCAGTTCCTCCGTAACAGTATGGCCCAGCGATACAGCACAGTTTGTAACTG
ATCGCGGCTTTTCTGATTAAACGTGTTCTACACGTGCATCATGAGCACCAGCTAAGGACT
TCGTACTGCATATGCATCTGTTATACTACGGGGTGGTATAAACTAGTCTGCAGTTCCTCC
GTAACAGTATGGCCCAGTGATACAGCACAGTTTGTAACTGATCGCGGCTTTTCTGATTAA
ACGTGTTCTGCACGTGCATCATGAGCACCAGCTAAGGACTTTGTATTGCATATGCATCTG
TTATTCTGTACTGGCTGCAGTTCCTGGGTGCGAACTGCGAAGTCCCCATTTTCCTCCTTC
ACAGATGGCAACTATGTACCCAAGTGATGATGACACATCAACTCAATTTTCATTCAAGAA
TGTATTGTGCCATGCTAACTAGTCACTCCGTCCCATAATATAAGACATTTTTTGGCACTG
CACTAGTGTCAAAAAAGTCTAGTTTTTAGTGTAACTTGTATTGCATCTAAAGTCTGTGCT
GGAAAACAAACAGTGTGCAGCGTAAACCGTTCATAACTAGACGTGCTTAGAACAGTGGCA
TACTGGCATGCCAAATCCTTTGGTAATCCAAAGAAGTATAAAGGGCCCTGGCCAGCTAAA
GATCCAATGAAGTACAAAGGGCCCTTGCCCAGCTAAAGCGTGTTAGTATGTACATGCAAC
TTTCATTATTCATACAACGAGGCATCTGAGCTGAGTATTTGATTTCCAGCAGTTTTACAA
ATATTCAGAACATAATTGAACTAAGTTGTTCTAATGTGGAATGTTCTCCTTTACAAATAG
CATGGACAAACCAGAGACCCATTTTACTGGGATCTTAGTGCCCAGCATCTGTGGCTACAG
GTCTTGCAAGCAGTCGGGGCCGTGAAGGCATCTGTTTCCTCGTAACCCAGCAATGCTCAG
TATCTTAGGATGTAAAGAAGTACAACCCATTGGCGCTGGCTTCTGGGACAATCTCCAGTG
TTGAATTGGCGAGTACTGCAGATATTCAGAGATCAAGATTAGCATTGGCACCAGGGGTTG
AACAACACATAAGCAAACTTATAAGCTTCTGTATAAGGGATAATACTTACCGATGGGATC
ATATGTTGGCAGGGAGATTTTTCGAGGGCAATGCTTTGATTTCGATAGGTTCTTGTACAT
TGCCGAAGTAGTAAGGCAATCACGAGGCTGGAATAAAACCAAGGTGAGCAGGGTTGTACT
GTACAGCAAAAGAGACCGAAGTGGAGAATCGTGGGCATTGTGAAGAGAATTGCATTTTGA
TGAAGAGCAACTCAAATAGGTTGACTAGTTTTGAAATCCAATCAATGTTGGAAACTTATG
CAACACTTGTTTACGACACAATAGGAGAAAGCAGCTTCGCTTTCTGAGAAATTTATAAGA
AACGCAAGCTGGACAGCATACTAAGTACATACCAAAAAAATCCAGACACAACTGTGCAAT
TCCAGTATAATAAAACTCCACCTCCCTATTTTGTTATCAGGATTTAGAGGGGTAGTTGGG
CGTATTCTAAAAAGTAACATGCTTCAAAATTATAGCCAAATGTAACTATAACTATCAGCC
CCGTGGGGAAAAAGAATTGGAAACATGTTGCTGATGGTAATCAGTTTTAAGAACAGTGTG
TTGCGGTAATCAGTATCACACTAATAGATCTCCTTTGCAAAAATTAAGACCTATCCGCCC
TGTGCGGAGACATCATTCCTAAATCAGCGAAGCTCTGTCCCCGCAAATATAAATGAAAAT
TGAGGAGACCCAGAAAAGATAACTCACCTTCAAATCTTTGGTGAAGCATAACCTTAGTTC
TTGAACTGAGCCCTTCTTGCAGATGATCTGCGGTGAGCCCCCAAAAGCATGCTTGATGGT
GTCAATGACATCACTCAGTGCATATTCTTTACCGTTGGAGACCAGGATATCTCCAGTCGC
CAACATTTCCTGCAATTCCAAACCAAATTATAACAATGCAAAAGAGACAAATTTCTATGA
CACGGTTTAGCATGAGTCAAATTCACACGAACTACAATTCAAGTGGTTTTAAGTTTGTTT
TCTTCATCCAGAAACCAAGCTAACTGAAATAACAAAGGTTCAGGTGCTATAGCCAACAAA
AGAAACCAATAATTCCTGCAAGAAATAACAATAATGCGCTACATCTAATGAGTCAGTGAC
CAGATGCTTACTGTCACGTTATATTTGAAGTAGAGATCAAGGGCAGTGCTGAAGTACTGT
AATTCTTCCCGAACAGCAGGGGCCGAGCATGTTCCATGCTTCTCTGTAAAAAAATTAAAA
ACGACGGAAACTTAGCAATGGAAATGAGACAATGTTTGTGCAGATGGATCAAAACTAGTA
ACTCTCCCTTATAACAATATTTCAGTTCATTAAGTCGAGTGGATTGAAGAACATTACCCC
ACTAAAGACAATCCACGAATGATCAATCAAGCAGGGACAATGCCATTATGCAAAACAACA
GGTAAGGGAACAGCACAAAAGGTTAGTAACAATTCCAATCGATGAATAATTTTTAGAGTC
GAATCCATCAGTTGTGACACTATACCTCATGAGCCCAGAAGGGGCCCCTACCACTGAAAC
AAGTGGAAGAGGACGAACAGTAGAGGGACGGCCAGTACTTGTCCAGCGTGGGCTTCAGAG
GCGTTATCTACACCAAATCAACCAAGACACGGCAGAACCATGCATCATTAATAGAATCTG
AAAACGGAGTGAGTGCAAGTCGATCTTCGTGTATCGGTAACGAATGGAATCGAACTTGTG
CATGATTAAATGAAGCTAGAGCGGCCGCGTATCAGTGTAAGCAAGGTCCCTGCGGCTAGC
ACCTTGTCCATGTCGAAACTGGTGCGGCGGCAGCACGACGGCCAAGTCCCGTCATCGTAG
TCCGGCCACAGCCCGTCTGTTCCATGAGCGAAAATCCAACCACGCCAGTGAGGAACTCAC
ATCCATCGACCAGGAACCGATAAAGCACAAAATTGAGCAGGATGGGCGCCGTGCACTTAC
GGATCGTGAACGTGTGGAGCGGCTCCTTCCTGCAGCGGTGAAACAAAGCAAAGCAGATTA
CGCGAGCACGGGTCAAGTCAAATCTCCGGAGCGCCAGAAACCCCCACCCGAGCCGAACTC
GAACGGGACCGCGCGCGGGGGTCGATGGGGCGGTGGCGGTGGAGGGAGGGAACGAGGGGG
AGGGAGGGCGGAGCAGTAGCACGTACCGGCAGCAGCCGTTGACGGCGCAGCAGTGGCGGG
GGGGGGGGGGGG